Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0608 ATGCAGATGAATTACAATTTCTCAGAAGAAGCTCATAGTTATTATCCACATTCAGAAAATAGTTCACCAAGTCATGCCAGAAAGATGAATCAAGGAGCAAAAGATGCATTCACAAATGACTACAAAAATAATACAAAGATGGCAACTAAACCAGCATCTAAATCTCACAAAACAGAATCACCAAGAGTTAAATCAGGATATTCAAGCTTTAAGAGTGATAGTTTAGATAACAAAACTGCACCAAGCATTAAACCACACACTGGAGGTGATATAAGGTGGGATGCAATTAACATAGCTTCAAAGGGTACCCCTCTTAACCTCAGCAATTTCAGGATTCTCAAAAGGGTTGGTTATGGTGACATTGGAAGTGTTTATCTTGTTGAACTTAAAGGAACAAAGGCTTTCTTTGCCATGAAAGTAATGGATAAGGCTTCTCTTGCAAGCAAGAACAAACTTCTTAGAGCAGAAACAGAAAGAGAGATACTTGGACTTCTTGATCACCCTTTTTTGCCTACTTTATATTCTTACTTTGAAAATGATAAGTATTATTGTTTGATCATGGAGTATTGTAGCAGTGGTAGTTTGCATTCTCTTAGGATGAAGCAACCTAACAAGCACTTCACTGAAGATGCTGCACGGTTTTATTGTTCAGAGATATTGTTAGCTCTAGAGTACCTACACATGCTTGGCATAGTGTACAGAGATTTAAAGCCAGAGAATGTTTTAGTGAGAGATTCAGGACACATAATGCTCTCAGATTTTGATCTATCACTTCGTTGCTCAGTGAATCCAACTCTAGTTAAATCTTCATCAGCACATATAAGCAATACAAGCATTAGTTCTTGTGCAATTTTAGATAATGAAAATGCAGTCTATGGTTGCATGCAACCCTCAAATTTCTTCCCAAGAATCTTGCCATCAAAAAAGACCCGCAAGTCAAAATCAGATTTTGGCCCTTTACTTGGAGGACACCTTCCAGAACTAATGGCAGAGCCTACAAATGTAAGGTCAATGTCCTTTGTAGGGACACATGAGTACCTTGCACCAGAGATAATTAAAGGTGAAGGACATGGTAGTGCAGTGGATTGGTGGACATTTGGTATATTCTTGTATGAACTTTTGCATGGGACAACACCATTTAAGGGTGCTGGAAACCGTGCAACATTGTTTAATGTTGTAGGACAACCATTAAGGTTTCCAGAAACACCACATGTTAGTTCTGTTGCACGTGACCTTATTAGAGGATTGTTGGTTAAAGAACCTAACAAAAGGTTTGCTTATACAAGAGGTGCTACAGAGTTAAAACAACACCCTTTTTTTGAAGGAGTGAATTGGGCTCTAGTTAGAAGTGCTACTCCTCCTATTATACCAAAACCACTAGATTTTTCTAAGTATGCTACCAAAGAAACTCTGGCACCAGCAACAGTAGTGGCAGATAAAAAGTTGGCAAATATTACAAGTCAGAATACTCACACAGATTCTGCTTACATAGATTTTGAGTATTTTTAG 1509 0.3751 MQMNYNFSEEAHSYYPHSENSSPSHARKMNQGAKDAFTNDYKNNTKMATKPASKSHKTESPRVKSGYSSFKSDSLDNKTAPSIKPHTGGDIRWDAINIASKGTPLNLSNFRILKRVGYGDIGSVYLVELKGTKAFFAMKVMDKASLASKNKLLRAETEREILGLLDHPFLPTLYSYFENDKYYCLIMEYCSSGSLHSLRMKQPNKHFTEDAARFYCSEILLALEYLHMLGIVYRDLKPENVLVRDSGHIMLSDFDLSLRCSVNPTLVKSSSAHISNTSISSCAILDNENAVYGCMQPSNFFPRILPSKKTRKSKSDFGPLLGGHLPELMAEPTNVRSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLHGTTPFKGAGNRATLFNVVGQPLRFPETPHVSSVARDLIRGLLVKEPNKRFAYTRGATELKQHPFFEGVNWALVRSATPPIIPKPLDFSKYATKETLAPATVVADKKLANITSQNTHTDSAYIDFEYF 502
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0608 502 Gene3D Phosphorylase Kinase; domain 1 105 197 - -
Lal9g0608 502 PANTHER FLIPPASE KINASE 1-RELATED 19 502 - -
Lal9g0608 502 SMART serkin_6 110 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g0608 502 SUPERFAMILY Protein kinase-like (PK-like) 107 473 IPR011009 -
Lal9g0608 502 PANTHER SERINE/THREONINE-PROTEIN KINASE AGC1-5 19 502 - -
Lal9g0608 502 CDD STKc_phototropin_like 108 461 - -
Lal9g0608 502 MobiDBLite consensus disorder prediction 1 83 - -
Lal9g0608 502 ProSitePatterns Serine/Threonine protein kinases active-site signature. 231 243 IPR008271 GO:0004672|GO:0006468
Lal9g0608 502 MobiDBLite consensus disorder prediction 62 81 - -
Lal9g0608 502 MobiDBLite consensus disorder prediction 1 28 - -
Lal9g0608 502 MobiDBLite consensus disorder prediction 36 51 - -
Lal9g0608 502 ProSiteProfiles Protein kinase domain profile. 110 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g0608 502 Gene3D Transferase(Phosphotransferase) domain 1 198 457 - -
Lal9g0608 502 Pfam Protein kinase domain 337 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g0608 502 Pfam Protein kinase domain 111 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lal9g0608 Lal-Chr9 4122498 4124734 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0608 57 502 AGC Kinase Gene Family AT3G12690 70.282 0.0 652
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lal9g0608 Pkinase 3.6e-37 CL0016
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0608 - - gmx:100802478 725.317
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0608 9 4122498 4124734 Lal9g0608 9 4122498 4124734 ECH
Lal11g1564 11 18687896 18690452 Lal9g0608 9 4122498 4124734 PCT
Lal1g1530 1 17484496 17488151 Lal9g0608 9 4122498 4124734 PCT