Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0601 ATGGAATCACCATTCAAAGGAGATATATTGAAAGGGAAGGTAGCTTTAATAACAGGAGGAGCTTCTGGAATTGGATTTGAAATAGCAACACAATTCGGTAAACATGGTGCTTCTGTTGCACTAATGGGTCGACGTAAGCAAGTTCTAGATTCAGCTGTTTCTGTTCTTAAATCACTTGGAATCTCTGCTATTGCTTTTGAAGGTGATGTTAGGAAACAACAAGATGCAACTAGAGTTGTTCAATCAACTTTTCAACATTTTGGAAAAATTGATATTCTTGTTAACTCCGCTGCTGGCAATTTTCTTGTTTCTGCTGAAGATCTTTCCCCTAATGGATTCCGAACAGTTATGGATATTGATTCTGTTGGCACATTCACAATGTGTCATGAAGCACTAAAGTATCTCAAAAAAGGAGGACAAGGAAGGAACTCTTCCAGTGGGGGAGTGATATTAAACATTAGCGCTACCTTGCATTATACAGCTAATTGGTATCAAGTTCATGTGTCGGCGGCTAAGGCAGCTATTGATGCCACTACAAGAAACTTGGCATTAGAATGGGGAACAGACCATGATATTAGAGTAAATGGGATTGCACCAGGTCCAATAAGTGGCACTACCGGATTGAGTAAATTGGCTCCAGATGAACTAAATAACAAGGAAAGAGAAGAAAGACCTCTGTATAAACTAGGGGAGAAATGGGATGTTGCCATGGCTGCTATCTACCTAGTGTCTGATGCAGGGAAATTCGTTAATGGCGATACTCTCATAATTGATGGAGGACTTTGGCTGAGCCAGCCTCGTTATATGTCAAAAGAGGCAGTGAAGCAGGTTTCACGGTCAATCGAAAAGAAGTCCAGAGTTGCACCATTCGACGTTCCGAAAAGCAAGCTGTGA 894 0.4105 MESPFKGDILKGKVALITGGASGIGFEIATQFGKHGASVALMGRRKQVLDSAVSVLKSLGISAIAFEGDVRKQQDATRVVQSTFQHFGKIDILVNSAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGQGRNSSSGGVILNISATLHYTANWYQVHVSAAKAAIDATTRNLALEWGTDHDIRVNGIAPGPISGTTGLSKLAPDELNNKEREERPLYKLGEKWDVAMAAIYLVSDAGKFVNGDTLIIDGGLWLSQPRYMSKEAVKQVSRSIEKKSRVAPFDVPKSKL 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0601 297 Pfam Enoyl-(Acyl carrier protein) reductase 19 261 - -
Lal9g0601 297 Gene3D - 2 268 - -
Lal9g0601 297 PANTHER PEROXISOMAL 2,4-DIENOYL-COA REDUCTASE-LIKE 1 297 - -
Lal9g0601 297 CDD TER_DECR_SDR_a 10 263 - -
Lal9g0601 297 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 11 263 IPR036291 -
Lal9g0601 297 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 88 99 IPR002347 -
Lal9g0601 297 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 156 IPR002347 -
Lal9g0601 297 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 168 187 IPR002347 -
Lal9g0601 297 PRINTS Glucose/ribitol dehydrogenase family signature 14 31 IPR002347 -
Lal9g0601 297 PRINTS Glucose/ribitol dehydrogenase family signature 88 99 IPR002347 -
Lal9g0601 297 PRINTS Glucose/ribitol dehydrogenase family signature 142 158 IPR002347 -
Lal9g0601 297 PRINTS Glucose/ribitol dehydrogenase family signature 168 187 IPR002347 -
Lal9g0601 297 PRINTS Glucose/ribitol dehydrogenase family signature 190 207 IPR002347 -
Lal9g0601 297 PRINTS Glucose/ribitol dehydrogenase family signature 225 245 IPR002347 -
Lal9g0601 297 PANTHER PEROXISOMAL 2,4-DIENOYL-COA REDUCTASE 1 297 IPR045017 GO:0008670|GO:0009062
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0601 Lal-Chr9 4043836 4045781 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0601 1 297 Acyl Lipid Metabolism Gene Families AT3G12800 73.490 8.67e-160 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0601 K13237 - gmx:100793630 503.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0601 9 4043836 4045781 Lal9g0601 9 4043836 4045781 ECH