Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0600 ATGCAGAACCAACATCAATACAATGATACCATGGAACCTAGAAATGAAGAGTTTCATCCTGCATCACGGTCGGTCGTGCAGGATCATCTGGATGTCATGCATATTAGTACAATAACTTCTGACTTTAATAGGTCAGAAAATAAACCTGTGCATAATTACTCCATACAGACCGGTGAGGAATTTGCTCTTGAATTTATGAGAGATAGGGTGAATCTCGGGAAGCCTGTCTTTCCTAACATTGTCGGTGAACCCAATTATTCGTCAGGTAATATGGAACTGAAAGGCATTTTAGACATTGGTCATACAGGTTCTGAAAGTGGATCAGATATATCTATGCTCGCAAAAGCTGAAAAAGGTCCAAAAGAGTTCTACAGGAGTAATTATGGATCAGTTCGATCAATTTCTAGAAATTCATCTAACCAAAACTTCCATGGTGTTGTCTCTTCTCGAGCTTCTGATAGCTCATCAATAAAGATGAAGGTTCTATGCAGCTTTGGTGGCAGAATATTACCGCGTCCCAGTGATGGAAAACTTAGATATGTTGGTGGTGAAACTCGTGTTATTTCTATAAGAAAGGACATCTCCTGGCAGGAGCTTATGCAGAAAGCATCATCAATATACAATGAGGTTCATGTGATAAAGTATCAGCTCCCCGGGGAGGATCTTGATGCCTTAGTTTCCATATCTTCTGACGAGGATCTGCAGAATATGATGGAGGAATGTCATGATCTACGCAGCAGACAAGGATCTGAAAAGCTTCGGGTGTTTCTATCATCTGTGAATGATTTGGACGATACTCGGTTTGGTCTTGGTAGCATTGATGGTGATTCCGAAATCCAATATTTAATTGCTATCAACGGCACAGACTCGGGATCAAGAAATAACTCAATACCTTATGGTGCAACCCCTTCAGCTAATAATATAGATGAATTGTACAAGGAAAATATAAAGAGGACGGATAGCAGAGTTCGGGTTGAATCATTTGGCGTCAGCAGTTCTTCCTTGACTGCCAATGTTAGCCCATCATTGACAATTAAGTCTTCACAGCCAATGCTACAAACCTCAAATGCTTTTGAAGCTTATCCAGTCTTTTATGATGACCAGATCATTCACCATGGAGAAAGTACTCAATATCCACTGCGCCATGATCTTGTTTATCAAGGGATTGTGAACGAAGGGCATGTATATAGTGAGTCGCAAGCACATATTTCAGATTTTCCAGCAATGCAGGTAAAAGGAAGGACTGATAATTTCATCTACACAAACAGTGGCCCTGGAAATGTTTTCTCCTTGGAAACACCATATCCGGTTCCATTGCAGTCATCTGATCGTAATTTGCAAGGCAATTTTTCAGAAGCATTGGCTACAGTCTCGGTATCAGAAGGGAACCATCCTGCATTGCCTTCACAAAACAAGAGTAAACTCCAGGCATCTGAACATAACTCTTTATCGGTTAATACTGTGAATCCCATACTGATTCCTAAATATGGTGAAGAAAACCTTTATGATACCCCTAGTGATGCTGAGTCCAATTTGATGGATTTGAGTTTCCTTGAACCACCTCCACTTCCCAACAGAGTCTATTATTCGGAAAGAATTCCTAGGGAGCAGGCAGATTTGCTGAACCGGTCTGTAAAGTCAGAAGATGCACGTGATTCTCACTTACTCATGTCTGATTTACTATCTGACTTCAACCAGAATAATTCAGTTACAGAATACAGTGGCGGAACTTCCGTGATAAGCTCAACGATAAAGCCTGCGCATACAGATGGCCATATCATTCATGATGGCTTTACCCAGCTGCAAAGGCACAAACCTGATGCAGTAAGTCAGGTTTCTTTTGTTGAGCGTGACGAAAATCCGTCACCTAAACTTCCACACTTTAACCGGGGTGAGGTTTCTACCAGGGAATCAAACAATGATGTTATGATCCAAGGACAGCCTTTTTCTGCAACCGAGAACACCAGCCAACATGTTTATCAAGATTTTCCCTCGGATGCTGTTTCCACACATGCTCAGGGTGACATTCTGATTGATATCGATGACAGGTTTCCCCGTGATATTATTTATGATATGTTTTCCAAAGCAACAATTTCCGATAATTCATTGAGCACTGTTCCATTCCCAATGGATGGAACAGGCTCGAGCTTAAACATGGAAAGTCATGAGCCTATAGGTTGGTCATATTTTCAGAAGTTGGCTCAACATGGGTTTGATAATATGTCTCTAATTGATGGGGATCAACTTGGTTTTTCATCTGCACAAAGACAAGTACATGAAGAGGAAAGTATATCTCAGCACTCTACACCTCTACCAGCTGATGGAGTTTTGGCAGAACAGAGAGAATCTCGCCTCAATTTTGGTGAAGAAAATCAAAAAAACTTACCTGTAACTACTACAACAGAGGTTATTGTTCTTAACCCAAACTATGATCATTCTCAAATTAAGGACACAGAAAATAAGAATATGGATGCTATGATGGAAAACATAATAACACAAAATTCTCAATACAAGGATGCCAGAGATGAAACAAATAATGCAGGTATACCCCAACAAGATCCTTCTTTGGGGGATTTAGACTTCAGTACTCTGCAGGTACCATGCTTGGATATATCTTTTTTTCCCTGTCCCTATATCTTCATTTTAGAGGTTGATCTTGGCGCAACGGTAAGGTTGTTGCTTAGTGACCATGAGGTCACGGTTCAAATCCTGGAAACGTCATCTCCGCTTGTAGGGCTCATAAAGAATGAAGATCTTGAAGAGCTGCGAGAACTAGGTGCTGGAACCTTTGGAACTGTGTATCACGGAAAATGGCGCGGAACAGATGTTGCCATTAAAAGAATAAAGAAAAGCTGTTTCACTGGCCGATCTTCAGAGCAAGAGAGACTGACTGTAGAGTTCTGGCGTGAAGCTGACATACTTTCCAAGCTTCACCATCCAAATGTGGTGGCATTTTATGGTGTAGTCCAAGACGGGCCAGGAGGAACATTAGCTACTGTTGCAGAGTTCATGGTGGATGGTTCTCTTAGACATGTTTTGCTTCGTAAGGATAGATATCTCGATCGGCGCAAGAGACTGATAATTGCCATGGATGCTGCATTTGGAATGGAATATTTACATGCAAAAAATATTGTGCATTTTGACTTGAAATGTGACAATTTGCTTGTGAATTTGAAAGATCCTTTACGACCAATATGCAAGGTTGCTGATTTTGGCCTTTCAAAAATTAAACGAAACACCCTTGTTTCGGGTGGTGTGCGTGGAACCCTACCTTGGATGGCACCAGAGCTGCTGAATGGTGGAAGCAATAAGGTCTCAGAAAAGGTTGATGTGTTCTCTTTTGGCATTGTATTGTGGGAGATTCTTACTGGAGAGGAGCCATATGCTAATATGCACTATGGTGCTATCATAGGAGGCATTGTGAATAACACATTGAGACCAACAATCCCCGGTTATTGTGATCACGAGTGGAGAATACTAATGGAGCAGTGTTGGGCACCTAATCCTGCAGTCAGACCATGCTTCGCAGAAATCGCTCGGCGCTTACGTGAGATGTTAGCGGCTGCTCCTCAGACCAGAGGACAAGGCCACAACAAGGCATCTAAAGGACAACAGATTTGA 3621 0.4162 MQNQHQYNDTMEPRNEEFHPASRSVVQDHLDVMHISTITSDFNRSENKPVHNYSIQTGEEFALEFMRDRVNLGKPVFPNIVGEPNYSSGNMELKGILDIGHTGSESGSDISMLAKAEKGPKEFYRSNYGSVRSISRNSSNQNFHGVVSSRASDSSSIKMKVLCSFGGRILPRPSDGKLRYVGGETRVISIRKDISWQELMQKASSIYNEVHVIKYQLPGEDLDALVSISSDEDLQNMMEECHDLRSRQGSEKLRVFLSSVNDLDDTRFGLGSIDGDSEIQYLIAINGTDSGSRNNSIPYGATPSANNIDELYKENIKRTDSRVRVESFGVSSSSLTANVSPSLTIKSSQPMLQTSNAFEAYPVFYDDQIIHHGESTQYPLRHDLVYQGIVNEGHVYSESQAHISDFPAMQVKGRTDNFIYTNSGPGNVFSLETPYPVPLQSSDRNLQGNFSEALATVSVSEGNHPALPSQNKSKLQASEHNSLSVNTVNPILIPKYGEENLYDTPSDAESNLMDLSFLEPPPLPNRVYYSERIPREQADLLNRSVKSEDARDSHLLMSDLLSDFNQNNSVTEYSGGTSVISSTIKPAHTDGHIIHDGFTQLQRHKPDAVSQVSFVERDENPSPKLPHFNRGEVSTRESNNDVMIQGQPFSATENTSQHVYQDFPSDAVSTHAQGDILIDIDDRFPRDIIYDMFSKATISDNSLSTVPFPMDGTGSSLNMESHEPIGWSYFQKLAQHGFDNMSLIDGDQLGFSSAQRQVHEEESISQHSTPLPADGVLAEQRESRLNFGEENQKNLPVTTTTEVIVLNPNYDHSQIKDTENKNMDAMMENIITQNSQYKDARDETNNAGIPQQDPSLGDLDFSTLQVPCLDISFFPCPYIFILEVDLGATVRLLLSDHEVTVQILETSSPLVGLIKNEDLEELRELGAGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTVEFWREADILSKLHHPNVVAFYGVVQDGPGGTLATVAEFMVDGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHAKNIVHFDLKCDNLLVNLKDPLRPICKVADFGLSKIKRNTLVSGGVRGTLPWMAPELLNGGSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPGYCDHEWRILMEQCWAPNPAVRPCFAEIARRLREMLAAAPQTRGQGHNKASKGQQI 1206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0600 1206 Gene3D - 177 260 - -
Lal9g0600 1206 ProSitePatterns Protein kinases ATP-binding region signature. 925 950 IPR017441 GO:0005524
Lal9g0600 1206 CDD PB1_UP2 162 257 - -
Lal9g0600 1206 ProSiteProfiles Protein kinase domain profile. 919 1186 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g0600 1206 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 608 866 - -
Lal9g0600 1206 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 116 605 - -
Lal9g0600 1206 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 912 1202 - -
Lal9g0600 1206 SUPERFAMILY CAD & PB1 domains 174 264 - -
Lal9g0600 1206 MobiDBLite consensus disorder prediction 617 637 - -
Lal9g0600 1206 PANTHER SERINE-THREONINE PROTEIN KINASE 116 605 - -
Lal9g0600 1206 PANTHER SERINE-THREONINE PROTEIN KINASE 912 1202 - -
Lal9g0600 1206 PANTHER SERINE-THREONINE PROTEIN KINASE 608 866 - -
Lal9g0600 1206 Pfam Protein tyrosine and serine/threonine kinase 920 1182 IPR001245 GO:0004672|GO:0006468
Lal9g0600 1206 SMART serkin_6 919 1186 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g0600 1206 PRINTS Tyrosine kinase catalytic domain signature 1001 1014 IPR001245 GO:0004672|GO:0006468
Lal9g0600 1206 PRINTS Tyrosine kinase catalytic domain signature 1038 1056 IPR001245 GO:0004672|GO:0006468
Lal9g0600 1206 PRINTS Tyrosine kinase catalytic domain signature 1109 1131 IPR001245 GO:0004672|GO:0006468
Lal9g0600 1206 PRINTS Tyrosine kinase catalytic domain signature 1153 1175 IPR001245 GO:0004672|GO:0006468
Lal9g0600 1206 Coils Coil 823 843 - -
Lal9g0600 1206 Gene3D Phosphorylase Kinase; domain 1 913 1006 - -
Lal9g0600 1206 SUPERFAMILY Protein kinase-like (PK-like) 901 1181 IPR011009 -
Lal9g0600 1206 SMART PB1_new 173 260 IPR000270 GO:0005515
Lal9g0600 1206 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1044 1056 IPR008271 GO:0004672|GO:0006468
Lal9g0600 1206 CDD STKc_MAP3K-like 925 1182 - -
Lal9g0600 1206 Pfam PB1 domain 175 258 IPR000270 GO:0005515
Lal9g0600 1206 Gene3D Transferase(Phosphotransferase) domain 1 1007 1205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0600 Lal-Chr9 4033504 4041017 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0600 43 1202 MAP Kinase Kinase Kinase AT1G16270 44.231 0.0 889
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Lal9g0600 PK_Tyr_Ser-Thr 1.1e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0600 - - lang:109339366 2033.84