Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0587 ATGAACCATTTCATCCGCAAGCTCTCACGATTCACCAACTCCTCTCACTACACTCTCCTCCGATCCGAGTCACGCTCCATGTGCCTCCGCCATGACTCTCGCCGCCGTCGATATTGTGAAGTCCCCGCAGGACACATCCCGGTCTACGTGGGTGAAGAAATGGAGCGATTCGTGGTCAGCACTGAACTTCTGAACCACCCGGTTTTTGTTATGCTACTCAACTGGTCGGCTCAGGAATACGGTTACCATCAGAAAGGCGTTCTCCGAATCCCATGCCATGTTATTGCGTTCGAGCGAGTCCTTGAATCGCTTCGACTCGGTCTTGACTCGCGTGACCTTTACCATCTCATCACTTCCGAAGAAGTTCGTTGGCGAAAATGA 381 0.5223 MNHFIRKLSRFTNSSHYTLLRSESRSMCLRHDSRRRRYCEVPAGHIPVYVGEEMERFVVSTELLNHPVFVMLLNWSAQEYGYHQKGVLRIPCHVIAFERVLESLRLGLDSRDLYHLITSEEVRWRK 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0587 126 Pfam Auxin responsive protein 23 104 IPR003676 GO:0009733
Lal9g0587 126 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 2 119 IPR003676 GO:0009733
Lal9g0587 126 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR72 2 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0587 Lal-Chr9 3962790 3963170 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0587 41 120 Calmodulin-binding Proteins AT4G31320 38.750 9.67e-16 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0587 K14488 - twl:119985733 152.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0587 9 3962790 3963170 Lal9g0587 9 3962790 3963170 ECH