Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0585 AAGATGGGGAATGGAAGATCACCATGCTGTGATAAGAATGAAGTGAAGAAAGGGCCTTGGAGTCCTGCAGAAGATTTGAGACTCATATCTTTCATTCAAAAATATGGCCATGATAATTGGCGTGCTCTCCCCAAACAAGCTGGACTCATGCGATGCGGGAAAAGTTGTCGTTTGAGATGGGTAAATTATCTTAGGCCTGATTTGAAGAAAGGGGATTTCACAAAAGAGGAAATTGAAACCATATTGAAGCTACATGAGGCTTTTGGAAACAAGTGGTCAAAGATTGCGTCCCATTTGCCCGGAAGGACCGACAATGAGATCAAGAATGTATGGAATACCCATTTGAAGAAAAGATTAGCTAACAAAAAAACATCAGAGATTACTTCAAATGAAAACAAGATGGGGATATATATAGCACCATCCTTTATATCTTCATCTAAGCCAATTTTCATGAATGAAACACTAAATCCAGTCATTCCTACTGTTGGAAATGTGTATGATATGAAAGTGTCTGAGGTGGTAATGGTTAAAGATCCTGATGAAGATTTGGTAAAGAAAAGTTTCAATGAATTTATTGATATCACCAAGAACTCAAACCAGTCATCAACTTCAGTATCATTACAAGAAGCTGAGAAACCAAATTCTCTGATTGAAATGCCATTGGAAGCAGATTATGATCTTTGGAAAATCTTAGATAATATACCCATTCAATTAGGGCAAGTTGGTGCTAACAAACCCCCAAATTTTGGACAAGAGGGTGTTCATCAAGATGCTGAAACCAAAATGTATCTCCATGACTTGGGGAATGACTTTGGATCAGATGCAACAAAGGAGACAAACAAGGATCTATGCCTAGAGAATAATAATGCAATAGTTGAGCTAGGAATGAATCCTCAGCCATTTGATTTTTATGAGATTAGAAAGCCAGAATCTGATTCTGATATAGACTTGGGTTATGTTCATTGGTGGTCTTCTTGGCCTCAAAATCCTAGTCTTTAA 999 0.3754 KMGNGRSPCCDKNEVKKGPWSPAEDLRLISFIQKYGHDNWRALPKQAGLMRCGKSCRLRWVNYLRPDLKKGDFTKEEIETILKLHEAFGNKWSKIASHLPGRTDNEIKNVWNTHLKKRLANKKTSEITSNENKMGIYIAPSFISSSKPIFMNETLNPVIPTVGNVYDMKVSEVVMVKDPDEDLVKKSFNEFIDITKNSNQSSTSVSLQEAEKPNSLIEMPLEADYDLWKILDNIPIQLGQVGANKPPNFGQEGVHQDAETKMYLHDLGNDFGSDATKETNKDLCLENNNAIVELGMNPQPFDFYEIRKPESDSDIDLGYVHWWSSWPQNPSL 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0585 332 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 12 64 IPR017930 -
Lal9g0585 332 PANTHER - 187 290 - -
Lal9g0585 332 PANTHER - 2 147 - -
Lal9g0585 332 Gene3D - 72 135 - -
Lal9g0585 332 CDD SANT 19 64 IPR001005 -
Lal9g0585 332 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 187 290 - -
Lal9g0585 332 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 2 147 - -
Lal9g0585 332 Pfam Myb-like DNA-binding domain 17 64 IPR001005 -
Lal9g0585 332 Pfam Myb-like DNA-binding domain 70 115 IPR001005 -
Lal9g0585 332 CDD SANT 73 115 IPR001005 -
Lal9g0585 332 ProSiteProfiles Myb-like domain profile. 65 115 IPR001005 -
Lal9g0585 332 Gene3D - 16 69 - -
Lal9g0585 332 SUPERFAMILY Homeodomain-like 15 111 IPR009057 -
Lal9g0585 332 ProSiteProfiles Myb-like domain profile. 12 64 IPR001005 -
Lal9g0585 332 SMART sant 69 117 IPR001005 -
Lal9g0585 332 SMART sant 16 66 IPR001005 -
Lal9g0585 332 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 65 119 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0585 Lal-Chr9 3936294 3938518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0585 2 232 MYB Transcription Factor Family AT1G79180 44.161 2.91e-69 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lal9g0585 Myb_DNA-binding 9.6e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0585 K09422 - gmx:100101836 339.732