Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0581 ATGACTTGTTTTCCTTTATTATTTGGTAAGAAGGTGCCTTCTGTAGCTAAAAGAGATCCAGACATTGATGAAGAACTTCTAGGCCTTAAAAATGTAAGGATCTTCACCTACAAAGAACTAAGAAATGCCTGCGACAATTTCAGTTCAGCCAATAAAATCGGGGAAGGCGGTTTTGGTTCTGTTTATAAGGGATTGTTGAAAGATGGAAAGGTTGCTGCTATAAAAGTTCTTTCAGCTGAATCAAGACAAGGGGTGAGGGAATTCTTGACAGAGATAAATGTGATATCAGAAATAGAGCATGAATATTTGGTTAAGTTGTATGGTTGTTGTGTGGAAGGAGATCAAAGAATATTAGTCTACAATTACCTCGAAAACAATAGCATTGCACAAACCCTTCTAGGTGGAGGTTACAGTGATATCCAGTTCAATTGGAGAACACGAACAACGATATGCATCGGGGTTGCCCGTGGGCTCGCATTTCTTCATGAGGAAGTAAGACCACATATTGTTCATAGGGATATAAAAGCAAGCAATATTCTGCTTGACAAAGACCTTAAACCCAAGATTTCAGATTTTGGTCTTGCAAGGCTTATTCCATCACACTTGACACATGTTAGCACCCGAGTAGCAGGAACAATAGGTTATTTGGCACCAGAATATGCAATAAGGGGGCAGTTGACACGAAAAGCCGATATTTACAGTTTCGGCGTCCTCCTTGTGGAGATAACATGGGAGCTTTATGAGCAAGGGGAATTGATAAGGCTGGTAGATATATCACTAAACGGGTTCTTCGATGCCGAAGAAGCTTGTAGAATTCTAAAGATTGCCCTTCTTTGCACTCAAGATAACCCAAAGCTAAGGCCATCCATGTCTTCTGTGGTTAAGATGCTCAACAGAGAAATTGACATTGGTGAAATTAAGATAACAAAACCAGGGTTGATATCAGATATTATGGACCTTAAAGTTAAAGAACAAAAAAATAATAATGATATGAAAACTTCATGTTCATATAGTGCATCATCCTCTGCCTCAGAGAGACAGGGTAATACCATGTCATTTGCTGGTTCAAGTGAAGTAAATACAACATTCACTGTACAATATGATCCAAGTACATAA 1116 0.388 MTCFPLLFGKKVPSVAKRDPDIDEELLGLKNVRIFTYKELRNACDNFSSANKIGEGGFGSVYKGLLKDGKVAAIKVLSAESRQGVREFLTEINVISEIEHEYLVKLYGCCVEGDQRILVYNYLENNSIAQTLLGGGYSDIQFNWRTRTTICIGVARGLAFLHEEVRPHIVHRDIKASNILLDKDLKPKISDFGLARLIPSHLTHVSTRVAGTIGYLAPEYAIRGQLTRKADIYSFGVLLVEITWELYEQGELIRLVDISLNGFFDAEEACRILKIALLCTQDNPKLRPSMSSVVKMLNREIDIGEIKITKPGLISDIMDLKVKEQKNNNDMKTSCSYSASSSASERQGNTMSFAGSSEVNTTFTVQYDPST 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0581 371 ProSitePatterns Protein kinases ATP-binding region signature. 53 75 IPR017441 GO:0005524
Lal9g0581 371 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 2 242 - -
Lal9g0581 371 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 242 347 - -
Lal9g0581 371 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
Lal9g0581 371 Gene3D Transferase(Phosphotransferase) domain 1 123 308 - -
Lal9g0581 371 Gene3D Phosphorylase Kinase; domain 1 18 122 - -
Lal9g0581 371 ProSiteProfiles Protein kinase domain profile. 47 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g0581 371 PANTHER - 2 242 - -
Lal9g0581 371 PANTHER - 242 347 - -
Lal9g0581 371 MobiDBLite consensus disorder prediction 330 355 - -
Lal9g0581 371 CDD STKc_IRAK 53 299 - -
Lal9g0581 371 SUPERFAMILY Protein kinase-like (PK-like) 22 299 IPR011009 -
Lal9g0581 371 Pfam Protein kinase domain 49 243 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g0581 371 SMART serkin_6 47 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0581 Lal-Chr9 3906618 3909911 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0581 15 311 Receptor kinase-like Gene Family AT1G53430 53.292 4.56e-104 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lal9g0581 Pkinase 5.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0581 - - gmx:100797706 548.51