Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0579 ATGGCGGAAGAAATTGACGACATAGATTACTCTGATAATCTGTTCATGCGCCTGTTACAATGCAAGTTCTGTCGTCAAACCAATCGATTCGACTATGAAGGATTCAGCTACAAGATTCTCCAGACCATTGAAGAAGGCGTTTACGGCCGTGTTTACAGGTGCCGCCATAGCGCTACCGGTGACATCGTCGCCATCAAACATATCGAATTTGGTCACGAACAAATTGGCGTTCCATCTTCGGTTGTCAGAGAAGTCTCGCTTCTTCGAGCACTCGAACATGTCAACATTATTGGTTTGCTGAAGGTGTTGACCAAGGAAACATATGTTAACCTAGTTTTTGAGCCTCTTGATCAAGATCTTGGCCGCTATATTAGGGATAACGGAGGCGTTCAGGATCCATTGATTAGAAAGAGTTTTTTGTGGCAAATACTCTCTGGTGTGGCATATTGTCATGCGCACAAGGTTCTGCATAGAGATCTGAAACCAAAGAATCTTCTGTTCGATGAATCTAGAATGATAATCAAGATCGCTGATTTCGGTTTGGCTAGAGAATTTGGAGGAGACATGGTATTAACTAGATATGTAAGAAATAATACATTCTATTTGGATTTGGACCTCACAACTCACAAGTGCACCTTAACTCGACAGCCTGCAAATCGTTATTATAGGGCACCTGAACTCTTGCTTCACTCTGATCATTATTCATCTGAAATTGATGTATGGTCCGTGGGCTGTATATTTGGTGAGATGGTAATCGGAAAGCCTATATTCGGAGAAATGGGTACATGTGATGAATTAGATGCGATTTTCAGAATGTTAGGGACCCCCTCCGAGGAAACCTGGCCAGGAATCACACAATATCCTCTCTTTGGATCATATGCCATATATAATCCAATGGACCTGTCAACTTTTTTTTCTGCTCTTGAACCAGAAGGCCTTCAACTTCTAAAGATGCTGCTTTGTCTGGACCCGAAGAGAAGGATTTCTGCTGAAACTGCTCTGAAGCATGCATACTTCAAGGATCAATTAACCTGA 1035 0.4222 MAEEIDDIDYSDNLFMRLLQCKFCRQTNRFDYEGFSYKILQTIEEGVYGRVYRCRHSATGDIVAIKHIEFGHEQIGVPSSVVREVSLLRALEHVNIIGLLKVLTKETYVNLVFEPLDQDLGRYIRDNGGVQDPLIRKSFLWQILSGVAYCHAHKVLHRDLKPKNLLFDESRMIIKIADFGLAREFGGDMVLTRYVRNNTFYLDLDLTTHKCTLTRQPANRYYRAPELLLHSDHYSSEIDVWSVGCIFGEMVIGKPIFGEMGTCDELDAIFRMLGTPSEETWPGITQYPLFGSYAIYNPMDLSTFFSALEPEGLQLLKMLLCLDPKRRISAETALKHAYFKDQLT 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0579 344 PANTHER CYCLIN-DEPENDENT KINASE 31 196 - -
Lal9g0579 344 PANTHER CYCLIN-DEPENDENT KINASE 213 341 - -
Lal9g0579 344 Gene3D Transferase(Phosphotransferase) domain 1 118 344 - -
Lal9g0579 344 Gene3D Phosphorylase Kinase; domain 1 33 116 - -
Lal9g0579 344 SMART serkin_6 37 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g0579 344 PANTHER CELL DIVISION PROTEIN KINASE 213 341 - -
Lal9g0579 344 PANTHER CELL DIVISION PROTEIN KINASE 31 196 - -
Lal9g0579 344 Pfam Protein kinase domain 37 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g0579 344 SUPERFAMILY Protein kinase-like (PK-like) 36 341 IPR011009 -
Lal9g0579 344 ProSitePatterns Serine/Threonine protein kinases active-site signature. 155 167 IPR008271 GO:0004672|GO:0006468
Lal9g0579 344 ProSiteProfiles Protein kinase domain profile. 37 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0579 Lal-Chr9 3897364 3900033 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0579 36 341 Core Cell Cycle Gene Families AT3G48750 44.156 4.51e-88 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Lal9g0579 Pkinase 1.1e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0579 K02206 - gmx:100799974 311.227