Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0530 ATGGATAGCTACTACCACCCTCACTTTGATAGTAATGATGCACTTCTCCCACCGGGTTTTCGTTTCCACCCCACTGATGAGGAGCTTATCACATACTATCTCCTCAAGAAGGTTCTTGACAATACCTTCACTGGTAGAGCTATAACTGAAGTTGACCTTAACAAGTGTGAGCCATGGCAGCTCCCTGGGAAAGCAAAGATGGGTGAGAAGGAGTGGTACTTCTTTAGCTTACGTGACAGGAAGTACCCAACTGGGTTACGTACTAATAGGGCCACAGAAGCTGGTTATTGGAAAGCTACTGGGAAAGATAGAGAGATTTATAGCTCCAAGACTTGTGCTCTTGTTGGTATGAAGAAGACTTTGGTTTTCTACAAAGGAAGAGCTCCAAAAGGTGAAAAGAGCAACTGGGTCATGCATGAGTATCGCCTTGAAGGCAAATTTGCTTACCATTATCTCTCTAGGAGCTCCAAGGATGAATGGGTCATATCCCGTGTGTTCGAAAAGAACACCATAGGTGGTGGTTCCACCGTGTCCACCACCAGTGGTGCAAAGAAGACAAGGGTTAGCACCTCATCGGCAAGCATGAGCCTCTACCCTGAACCCGGTTCACCCTCTTCCATTATCCTTCCACCACTGCTGGACTTTTCTCCTTACACCACCCAAACCAGCAGCAGCGCCGCCTTCAACGACCGTGATAACTGCTCCTACGACAGCACCACCGCCTCTCAAATAGAGCACGTGTCCTGTTTCTCCACGATCTCTGATAATAACTTCAACAATGCGACCTTCAACCTTGTTCCGCCGTCGCAGACACCTCTGAATCTGGACGCTTTCACTCGGTTCCAGAGGAACGTTGGTGTTTCTGCCTTCCCTAGCCTGAGTTCTCTGCGAGATAACCTTCAACTCCCGTTCTTTTTCTCCTCAGTGTCTCAGCCAGTTCACGAAGACGGTGCGGCCGCCTTCGGGAACTGGCCAATGCTGGAGGAGCAGAAGGTGGTGCTTGGTGGTGGTTCCAGTAATGGGTTTAGACATTCCGAGCTTGATTGCATGTGGGAATATTGA 1062 0.4906 MDSYYHPHFDSNDALLPPGFRFHPTDEELITYYLLKKVLDNTFTGRAITEVDLNKCEPWQLPGKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSSKTCALVGMKKTLVFYKGRAPKGEKSNWVMHEYRLEGKFAYHYLSRSSKDEWVISRVFEKNTIGGGSTVSTTSGAKKTRVSTSSASMSLYPEPGSPSSIILPPLLDFSPYTTQTSSSAAFNDRDNCSYDSTTASQIEHVSCFSTISDNNFNNATFNLVPPSQTPLNLDAFTRFQRNVGVSAFPSLSSLRDNLQLPFFFSSVSQPVHEDGAAAFGNWPMLEEQKVVLGGGSSNGFRHSELDCMWEY 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0530 353 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 7 345 - -
Lal9g0530 353 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-LIKE 7 345 - -
Lal9g0530 353 Gene3D NAC domain 25 171 IPR036093 GO:0003677|GO:0006355
Lal9g0530 353 Pfam No apical meristem (NAM) protein 17 143 IPR003441 GO:0003677|GO:0006355
Lal9g0530 353 ProSiteProfiles NAC domain profile. 16 168 IPR003441 GO:0003677|GO:0006355
Lal9g0530 353 SUPERFAMILY NAC domain 12 168 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0530 Lal-Chr9 3554804 3556658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0530 4 353 NAC Transcription Factor Family AT5G53950 53.077 1.19e-119 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal9g0530 NAM 4.8e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0530 - - gmx:100788671 466.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0530 9 3554804 3556658 Lal9g0530 9 3554804 3556658 ECH