Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0523 ATGTCCAACTCAGTCTCTAGAAGAACTATTTACCAAGTCATTCGAATTCGATCTTCGAATCCTAGGGGATGGACAATTATCGATGGTGTTTATGTCTTTGATTCCCTTTACATTAATCATAGCAACAACAATGGTAGAGTCTCAAGGATTAACACTACCCGATACATGTATCATGGCAGCAGAAACAACAACAATAGTAGGGTCTCAAGGATGAATACTACTCCATACATGGATCATGACAACAACAACAACAACAACAACAACAACAACAACAACAATGGTGGGGTCTTAAGGGTGAACCCTGCCCTTCAAGATTCCATTCAAAATCTTGAAAGGTTCACAGTTGAAGGAGCATCAGACTCAACTTCTTGTATGGCTTCATGTTCAATATGTCTTGATGAGCTTGCAGTTGGATCAGAAGCAACTCGCATGCCTTGCTCTCATGTCTATCATAACCATTGCATCATTAAGTGGCTCAACACATGTAACACATGCCCTTTGTGCAGAAGTACAATATAG 519 0.4008 MSNSVSRRTIYQVIRIRSSNPRGWTIIDGVYVFDSLYINHSNNNGRVSRINTTRYMYHGSRNNNNSRVSRMNTTPYMDHDNNNNNNNNNNNNNGGVLRVNPALQDSIQNLERFTVEGASDSTSCMASCSICLDELAVGSEATRMPCSHVYHNHCIIKWLNTCNTCPLCRSTI 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0523 172 Pfam Ring finger domain 127 169 IPR001841 -
Lal9g0523 172 ProSiteProfiles Zinc finger RING-type profile. 128 169 IPR001841 -
Lal9g0523 172 PANTHER F6A14.12 PROTEIN-RELATED 66 170 - -
Lal9g0523 172 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 66 170 - -
Lal9g0523 172 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 88 172 IPR013083 -
Lal9g0523 172 SMART ring_2 128 168 IPR001841 -
Lal9g0523 172 SUPERFAMILY RING/U-box 127 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0523 Lal-Chr9 3502813 3503331 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0523 92 169 C3H Transcription Factor Family AT1G14200 38.462 2.14e-17 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0523 - K11982 pop:7479137 85.5001