Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0521 ATGGAGGCCAGGAGTAATGAGAGGAAGAGAACTTTGATTGAGAATGTAAGAAAGGGTAGCACAGTTGAAGAAGTGGAGAATGAAGTAGAAGAGGAGTATGAAAATGTTAGTGTTGAACATCTTACAGAAGAAGAGAAGAAGAAAGTGGTTGGTGGGAGAAAAGGTTCATCAATTGGAGGAATTTCTCCACCTTCTTGCCAAGCAGAGAAGTGTGGAGCTGATCTGACTGATGCAAAGAAATATCATCGCCGCCATAAGGTGTGTGAATTCCATTCCAAGGCACCTGTTGTGGTGGTTGCAGGCCTGAGGCAGAGGTTTTGCCAGCAATGTAGCAGGTTCCATGACCTGGCTGAGTTTGATGAAGCTAAGAGAAGCTGTCGAAGACGCTTGGCCGGACATAACGAAAGGCGTCGAAAAAACAACCCTGAAGCATGCAATGAGGGCTGCAGGCACAGCAAAGGCCATCACCCTAAGGAAAGCCAATGCAGGATTGGTGATGAGAGGGGTCTTATTCAGATGAATATGGTGGCAGAGACTTCTGGTTACAAATCTTTTCATATCAGATGA 567 0.4568 MEARSNERKRTLIENVRKGSTVEEVENEVEEEYENVSVEHLTEEEKKKVVGGRKGSSIGGISPPSCQAEKCGADLTDAKKYHRRHKVCEFHSKAPVVVVAGLRQRFCQQCSRFHDLAEFDEAKRSCRRRLAGHNERRRKNNPEACNEGCRHSKGHHPKESQCRIGDERGLIQMNMVAETSGYKSFHIR 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0521 188 SUPERFAMILY SBT domain 64 144 IPR036893 GO:0003677|GO:0005634
Lal9g0521 188 ProSiteProfiles Zinc finger SBP-type profile. 63 140 IPR004333 GO:0003677
Lal9g0521 188 MobiDBLite consensus disorder prediction 136 161 - -
Lal9g0521 188 Gene3D - 56 127 IPR036893 GO:0003677|GO:0005634
Lal9g0521 188 Pfam SBP domain 66 139 IPR004333 GO:0003677
Lal9g0521 188 MobiDBLite consensus disorder prediction 133 161 - -
Lal9g0521 188 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 25 150 IPR044817 GO:0003677
Lal9g0521 188 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 25 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0521 Lal-Chr9 3491014 3492461 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0521 25 188 SBP-box Gene Family AT3G15270 46.429 5.12e-42 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lal9g0521 SBP 4.3e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0521 - - aprc:113864686 243.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0521 9 3491014 3492461 Lal11g0198 11 1407145 1409370 ECH
Lal9g0521 9 3491014 3492461 Lal9g0521 9 3491014 3492461 ECH