Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0508 ATGGAGCTTGAGATTGCAGATATTGAGTCTCAAATTACTTACAAAGCAACTGTTCAAGAAGAATCACGTGACATCTTTCACAACGGAAATCGTTCGATAACTCTCAAGTTCCACAATGTTGTGTACAAAATTCAGACAAAAAAAGTGGGATTACTTGAGAAGAACAAAAAAGCAGAAGAAAAAGTGATACTAAATGGAGTAACAGGAATGGTTGAGGCTGGTGAAATTCTAGCCATGCTTGGTCCATCTGGAAGTGGCAAAACAACTCTTCTAACAGCCTTGGGAGGAAGGCTTGGAGGTCAGCTTCAAGGAACCATAACTTATAATGGCAAACCATTCTCAAATTCAATGAAGAGAAAAACTGGTTTTGTTACACAAGATGATGTTCTCTATCCTCACTTAACTGTCACTGAAACTCTAGTCTTCACTGCTCTTCTAAGATTGCCTAATAGTTTCACCAAAGAAGATAAAATCATGCATGCAAATGCAGTCATGACTCAACTTGGTTTAACTAGGTGCAAGAATAGCATCATTGGAGGGCCATTGCTTAGAGGGATTTCAGGGGGGGAGAGGAAAAGGGTTAGCATTGGACAAGAAATGCTCATAAATCCAAGCTTGTTGTTTCTTGATGAACCTACCTCTGGCCTTGACTCAACAACAGCTCAAAGGATTCTATCAACTTTGTGGGAGCTAGCAAGTGGAGGAAAAACTATTGTGATGACAATACACCAACCTTCAAGTAGGATATACTACATGTTTCACAAGGTGTTGCTGCTATCAGAAGGGAATGTATTGTATTATGGAAAGGGGTCTGAAGCTATAGAATATTTCTCTAATATTGGATATGCCCCTACAATGCCCATGAACCCTGCAGATTTCCTTTTAGATCTTGCAAACGGTGTCTACACAGATCAACCGAATGAGGACCATGCCTTAAACAAACACAAATTGATTTCTGCATATAAAAACTACTTCAATACCAATTTGAAGCCCACTCTTCATGAGATTCCTGATTATGGTAAAAGTCAAGGCAGGTTTGAAGACAATGGGGTTGAGAAATGGCCTACCACTTGGTGGCAGCAATTCTCTGTGCTGCTAAGAAGATATGTAAAAGAGAGAAAACATGAATCATTTTCTGGCTTAAGGGTTTGTCAGATCCTCCTGGTTTCCTTTATTGCAGGATTACTCTGGTATAAGTCTGATATTTCACACTTGCAGGATCAGATTGGACTTCTATTTTTTGTTGCAAGTTTCTGGGCTGTTTTCCCTCTCTACCAAGCAATCTACACCTTCCCAAAAGAGATATTGATGCTGAAGAAAGAACGTTCCTCTGGAATGTATAGGCTCTCTTCATACTTCTTTTCAAGGATGGTAGCTGATCTTCCAATGGAACTTATTCTACCCATCATTTTTCTTTTCATAATCTATTGGATGGCAGGGTTAAAAGCTAATGTAGTTAACTTCATATACACATTGTTCAGTCTCATACTCAATGTGTTAGTCTCACAAGGGATAGGCCTTGCTATTGGTGCTATTGTATTGGATCAAAAATCAGCAACCACACTTGCCTCAGTGATAATGCTAAGTTTTTTGCTGGTTGGTGGGTTCTATGTTCAACATGTGCCAAAATTTATATCATGGATTAAGTACATCTCCACAAGTTACTATGTATACCATCTCTTGATGGGGTCTCAGTATGACACTAGTGACACATACCCATGTTCTAAGGGACAGTGTTTAGTTTCAGAATTTCCAATGATAAAGCAAATTGGTCTTCATTTAAGAGGCCAAATCATAGCTGCATCTGCTTTAGGGTTAATGCTAATAGGGTACAGACTTGTGGCTTATTTTGCTCTTATGAGGATTGGGTACTTAGTAGAACAGAATCAAAGCCTGTCTAAGCTTTCTTGGGGTGACAATGATGTGGATGTTGAAACTCGGCTTAAGAAAAAGTCGATCCAACATACGAGCTCTCACATACTGGAGTTTGAGGAGGGTGGTGTACACAACTTCACACTCTTGTGA 2025 0.3941 MELEIADIESQITYKATVQEESRDIFHNGNRSITLKFHNVVYKIQTKKVGLLEKNKKAEEKVILNGVTGMVEAGEILAMLGPSGSGKTTLLTALGGRLGGQLQGTITYNGKPFSNSMKRKTGFVTQDDVLYPHLTVTETLVFTALLRLPNSFTKEDKIMHANAVMTQLGLTRCKNSIIGGPLLRGISGGERKRVSIGQEMLINPSLLFLDEPTSGLDSTTAQRILSTLWELASGGKTIVMTIHQPSSRIYYMFHKVLLLSEGNVLYYGKGSEAIEYFSNIGYAPTMPMNPADFLLDLANGVYTDQPNEDHALNKHKLISAYKNYFNTNLKPTLHEIPDYGKSQGRFEDNGVEKWPTTWWQQFSVLLRRYVKERKHESFSGLRVCQILLVSFIAGLLWYKSDISHLQDQIGLLFFVASFWAVFPLYQAIYTFPKEILMLKKERSSGMYRLSSYFFSRMVADLPMELILPIIFLFIIYWMAGLKANVVNFIYTLFSLILNVLVSQGIGLAIGAIVLDQKSATTLASVIMLSFLLVGGFYVQHVPKFISWIKYISTSYYVYHLLMGSQYDTSDTYPCSKGQCLVSEFPMIKQIGLHLRGQIIAASALGLMLIGYRLVAYFALMRIGYLVEQNQSLSKLSWGDNDVDVETRLKKKSIQHTSSHILEFEEGGVHNFTLL 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0508 674 Pfam ABC-2 type transporter 243 310 IPR043926 GO:0140359
Lal9g0508 674 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 35 286 IPR003439 GO:0005524
Lal9g0508 674 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 279 IPR027417 -
Lal9g0508 674 ProSitePatterns ABC transporters family signature. 186 200 IPR017871 GO:0005524
Lal9g0508 674 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 13 623 - -
Lal9g0508 674 Pfam ABC-2 type transporter 360 566 IPR013525 GO:0016020|GO:0140359
Lal9g0508 674 PANTHER ABC TRANSPORTER G FAMILY MEMBER 21 13 623 - -
Lal9g0508 674 SMART AAA_5 73 263 IPR003593 -
Lal9g0508 674 Gene3D - 49 280 IPR027417 -
Lal9g0508 674 Pfam ABC transporter 64 214 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0508 Lal-Chr9 3425780 3429294 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0508 63 300 Calmodulin-binding Proteins AT2G36910 27.459 6.53e-13 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0508 K05681 - gmx:100812397 925.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0508 9 3425780 3429294 Lal9g0508 9 3425780 3429294 ECH