Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0507 ATGGGAGTTCCAGAGAAAGATCCACTAGTACAATTGAGTTTACCTGCTGGTTTTCGGTTTTTTCCAACAGATGAAGAGCTTCTTGTTCAATACCTATGCCGAAAGGTAGCTGGCCATCATTTTTCTCTTCCAATCATTGCTGAAATTGACTTGTACAAGTTCGACCCATGGGTTCTACCAGGCAAAGCTCTATTTGGTGAGAAAGAGTGGTACTTTTTTAGCCCCAGAGACAGGAAATATCCGAATGGTTCACGACCCAATAGGGTTGCTGGTTCTGGGTATTGGAAAGCAACTGGAACAGACAAGATCATCACCACTGAAGGTAGAAAAGTTGGAATAAAAAAAGCACTTGTTTTCTACATTGGTAAAGCACCCAAAGGAACCAAAACAAATTGGATTATGCACGAATATCGCCTTCTTGATTCTTCTCGAAAGAACAACCGCAGTGCTAAGCTAGATGATTGGGTTCTGTGTCGGATTTACAAGAAGAATTCGAGTGCGCAAAAGACTATGATACCAAGCTTTTCCAGCAAAGAATACAGCAATGGAGGATCGTCTCCTTCTTCGTCGTCTCATGTAGAAGACATGATTGAATTACCTGAAATAAATGAGCAGTTCTTCACGCTTCCACGCATGAGCTCGCTGAGAACTTCACAGCAGAACCAGGAGGGTTTTCAGAACCTAGGGAATTTCTCTGATTGGGTTAACTCGTCCGGTTTAGACTCGGTACCCGAGTTTCAAACTCAGGGGATAGTGAATTACGGTTGTAATGACCTCTTTGTCCCTTCTATGACGCAATTATGCCACGTAGACTTGACGGCGGAGGAAGAGGTTCAGAGTGGCATAAGAAACCAACGAAAGATTAACAACAATTCTGGGTTTTATCAGCAGAATCAGAAAATGTTCTTACAATATAATGATCCGTTTAGTTTCGGATACCCGAATCAACAAGATGGGTTCAGGTTTACCAAATGA 975 0.4226 MGVPEKDPLVQLSLPAGFRFFPTDEELLVQYLCRKVAGHHFSLPIIAEIDLYKFDPWVLPGKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFYIGKAPKGTKTNWIMHEYRLLDSSRKNNRSAKLDDWVLCRIYKKNSSAQKTMIPSFSSKEYSNGGSSPSSSSHVEDMIELPEINEQFFTLPRMSSLRTSQQNQEGFQNLGNFSDWVNSSGLDSVPEFQTQGIVNYGCNDLFVPSMTQLCHVDLTAEEEVQSGIRNQRKINNNSGFYQQNQKMFLQYNDPFSFGYPNQQDGFRFTK 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0507 324 Gene3D NAC domain 23 169 IPR036093 GO:0003677|GO:0006355
Lal9g0507 324 ProSiteProfiles NAC domain profile. 14 163 IPR003441 GO:0003677|GO:0006355
Lal9g0507 324 SUPERFAMILY NAC domain 10 164 IPR036093 GO:0003677|GO:0006355
Lal9g0507 324 Pfam No apical meristem (NAM) protein 15 139 IPR003441 GO:0003677|GO:0006355
Lal9g0507 324 PANTHER NAC DOMAIN-CONTAINING PROTEIN 55 1 297 - -
Lal9g0507 324 PANTHER NAC TRANSCRIPTION FACTOR 56 1 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0507 Lal-Chr9 3420281 3422378 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0507 1 296 NAC Transcription Factor Family AT4G27410 60.252 5.60e-119 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal9g0507 NAM 8e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0507 - - gmx:100811301 451.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0507 9 3420281 3422378 Lal9g0507 9 3420281 3422378 ECH