Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0506 ATGGAGAGTACTGAGTCATCGATCGATTCACAACAACCGAACTTGCCACCTGGGTTCCGGTTCCACCCCACAGATGAAGAACTCGTTGTTCACTACCTCAAGAAAAAGGTTTCCTCTGATCCTCTCCCTGCATCTATAATCGCCGATGTTGATCTCTATAAATTTGATCCATGGGAACTACCAGGTAAGGCATCGTTTGGGGAGGAAGAGTGGTACTTTTTTAGCCCAAGGGAGAGGAAGTACCCGAATGGAGCGAGGCCAAACAGAGCTGCAACTTCTGGGTATTGGAAAGCAACAGGAACTGATAAACCTGTGTTGTCATCTAGTGGGGCCCAGAAGGTTGGGGTTAAGAAAGCTTTGGTTTTCTATGGTGGGAAGCCACCAAGAGGGATCAAAACCAATTGGATCATGCATGAATACCGAATTGCTGATAACAAACCTACTAATAATAAGCCTCCTGGATGTGACTTGGGAAACAAGAAAAATTCTCTAAGGCTGGATGATTGGGTATTGTGCAGAATCTACCAGAAAAGCAATACAAACAGGTCTCCTATGGAGCATGAGAGGGATGATTCCATGGATGACATGATTGGAGGGTTACCTTCAACCATCAACGTGGGCCATATGAATGTGGGGTTTCACTTGTCAAAGATGTCCACAAACTACACTACTACTAATGTTTCATTGTTGGAAAATGACCAAAACTTCTTGGAAGGGTTGATGTTAGGCAATAATGGTGTGCTGAACACAACAAGTGCAATATCATCTCATTTGGAAACCTCAAACATTGCCTCCAAAAGAACACTCTCATCACTATATTGGAACAATAATAATGTTCATACTGAAGATGTGGATGGTATAACCTCATTGTCTAACAAAAGGTTCAATTTTATGGACAGTGCTGCTGGGGATTGCAATGTTGTGAGGTCTCAAGAAAATGGCACTGCTGTTAACTCTATTGCAACCTTGCTTAACCATCATCTCCCACAACAAGCACCTAATTCAATGCAACAACAACACACAATGCTTGGGTCTATAGGAGATGGATTATTTCGGACACCATATCAAATACAAGGGATGAATTGGTATGGTTAA 1095 0.4247 MESTESSIDSQQPNLPPGFRFHPTDEELVVHYLKKKVSSDPLPASIIADVDLYKFDPWELPGKASFGEEEWYFFSPRERKYPNGARPNRAATSGYWKATGTDKPVLSSSGAQKVGVKKALVFYGGKPPRGIKTNWIMHEYRIADNKPTNNKPPGCDLGNKKNSLRLDDWVLCRIYQKSNTNRSPMEHERDDSMDDMIGGLPSTINVGHMNVGFHLSKMSTNYTTTNVSLLENDQNFLEGLMLGNNGVLNTTSAISSHLETSNIASKRTLSSLYWNNNNVHTEDVDGITSLSNKRFNFMDSAAGDCNVVRSQENGTAVNSIATLLNHHLPQQAPNSMQQQHTMLGSIGDGLFRTPYQIQGMNWYG 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0506 364 MobiDBLite consensus disorder prediction 1 20 - -
Lal9g0506 364 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 336 - -
Lal9g0506 364 SUPERFAMILY NAC domain 9 177 IPR036093 GO:0003677|GO:0006355
Lal9g0506 364 ProSiteProfiles NAC domain profile. 15 177 IPR003441 GO:0003677|GO:0006355
Lal9g0506 364 PANTHER NAC TRANSCRIPTION FACTOR 56 1 336 - -
Lal9g0506 364 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Lal9g0506 364 Gene3D NAC domain 24 182 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0506 Lal-Chr9 3407717 3410478 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0506 1 363 NAC Transcription Factor Family AT3G15510 49.485 8.13e-115 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal9g0506 NAM 2.5e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0506 - - gmx:100784578 512.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0506 9 3407717 3410478 Lal9g0506 9 3407717 3410478 ECH