Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0484 ATGGAAGAGAAGTGTGAGTTGTGTGAAAAGAAAGCAACGGTGTATTGTAACTCTGATGAGGCTAAGCTATGTTGGTTATGTGACGCAAGAGTTCACAGTGCTAATTTCTTGGTAGCTAGACACATAAGGGTTCTTCTATGTCGTATCTGCAATTCTCATACTCAGTGGAAAGCTTCTGGACCCAAACTCATTCCCTCTTCCTCATTCTGTCACCCTTGTGTGGCGAATGGAAGAACTAGATTACATCGTCATGTGGTTTATGATGATGGAGGATATATTCCTGATTCTGATGAAGATGAAGATGAAGAAGAGAACAAGGTGGTACCATTGTACTCTCCTTCGTCACCTGAATCATCTTCTGCTTCTGCATTGAAGCGACATCAAGATAACTCATTCTCCATCAATTCTAATGTAGTAAATGTGCAAAACAAACTCTCCATGGAATCCGCGCAGAATAAGAATGGTAATGGGTACCCGAATCGGCGAGTACCCGTAAAAAATATCCGCAACGGGTCGGGCTTGAGTCCATGTTTTAGACCCATGGATAATTGA 552 0.4221 MEEKCELCEKKATVYCNSDEAKLCWLCDARVHSANFLVARHIRVLLCRICNSHTQWKASGPKLIPSSSFCHPCVANGRTRLHRHVVYDDGGYIPDSDEDEDEEENKVVPLYSPSSPESSSASALKRHQDNSFSINSNVVNVQNKLSMESAQNKNGNGYPNRRVPVKNIRNGSGLSPCFRPMDN 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0484 183 PANTHER OS08G0178800 PROTEIN 4 151 - -
Lal9g0484 183 CDD Bbox1_BBX-like 4 46 - -
Lal9g0484 183 MobiDBLite consensus disorder prediction 146 183 - -
Lal9g0484 183 SMART bboxneu5 1 46 IPR000315 GO:0008270
Lal9g0484 183 MobiDBLite consensus disorder prediction 111 129 - -
Lal9g0484 183 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 4 151 - -
Lal9g0484 183 ProSiteProfiles Zinc finger B-box type profile. 1 46 IPR000315 GO:0008270
Lal9g0484 183 MobiDBLite consensus disorder prediction 91 129 - -
Lal9g0484 183 Pfam B-box zinc finger 3 43 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0484 Lal-Chr9 3258023 3258749 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0484 2 75 C2C2-CO-like Transcription Factor Family AT5G54470 59.459 5.93e-27 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0484 - - lang:109355125 206.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0552 1 3571170 3571640 Lal9g0484 9 3258023 3258749 LSH
Lal2g0550 2 3320262 3320873 Lal9g0484 9 3258023 3258749 LSH