Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0482 ATGAAACTACAAGACTCATCTTTTGGTCTTTTCAATCTGCTGATTATGTTGTCTCTTACTTTGTTGCAGTCCACAGACGCAATCACCTATAATGAAACCTTACAAATGGGCCAATCAATCAGAATCTCAGACACTATTGTGTCAGCTAAAGGAAACTTCGAACTGGGTTTCTTCACTGAGGAGAACTCGACTGAGTATTTTGTAGGAACATGGTTTAAGAAGATTCCCGGTAAGAAGATTGTCTGGGTTGCAAACAGAAATCATGAATTCACAGATTCCTCTGCTATTCTTACAGTATATAATGATGGCAATCTTGTGATTATGCAAGACGAATTGCTATATTTCGTGACCAACATCTCTAGTAAGAGCAATAGTACTAGTACACATGCCATGCTCTTAGATTCAGGTAACTTGGTACTGTTGGATGACTTGACTTTAGAAATTTTATGGCAGAGTTTTAACTATCCCACACATACCCTTTTGCCTGGGATGAACATAGGGGTTGACTCAGTATCAGGATACCCTTGGTCACTGATATCATGGACAAGTGCAAATGATCCTCATCCTGGTATTTTCTCCTTAGAAGTAGTTGAGAATCTCAATTCATGGTTGCTAGTAATCAAGAGGAATTCTGACAAATACTGGATTGGTGATCAATTATCTAATTTTACACTTGGAAGTTTTGAACGTAATAGCAATGCTTTCATGGATAAGTTAAGGGGAACCTTTTTTATCACTTGGCAGGGTGAATATGGTTCTCTTCTGGTGCTAGAAGTATCCGGGGATCTCAATCAACTGTCTTGGTCAGACAATGATAAACAATGGATTTCTATTCAGTCATCAAAGTGTGGGACAAGGGGTTTATGTGGGAACTTTGGTGTTTGCAATCCACAAGCCATGATCACATGTGATTGTGTACCTGGTTTTGAACCGAATGACTCGAGTTCGGGGATAGAGGGTAATACATCAGCTGGCTGTAAGAGGAAAAAGCCGTTGCTCTGCAGCAACACTAGCAGTGATGGTTCCACTGATGGATTTAAACTTATCAAGGCAGTGGAGTTTCTAACAAATGATTTGTTTGTCTTGAACACTTCGAATGCATTAGTATGTCAAAGAACTTGTTATGAGAACTGTTCTTGCCTAGCCTATGCTTATAATTCTCAAAGTGAGTGCTTGTTATGGTATGATCATGTACTGGATCTGAAGAATATCTCAGTTGATGCTGGATATGCTGATAATCAATTCCCAAGTTTCTTTCTCAAACTTGCTGCTTCTGAAATAAAAGATGAGTTGAACCCAGGGAATAATCTGGGATACAAGTCTAACAACAGCAGCAAGAAACTATCAAAAATTGGCATAATATCTGTGGCAGTTGCTGCAATGCTTATACTAGGCCTCTTTGTTTACTTCTACTATAAGTGGAAAAAGCTAAGGGGGTCAGGGGAGGACCTTCTACTATTTGATGTAGGCATGGGCATGAAAGTTGAAAGCTCTGATCATAATGAAGCAGATAAGATTGCAAAAGTTGACAAGAGGGAAGTCAAATTGCCTTTTTTCAGTTTTGCAAGTGTTTCTTCAGCAACTGATAACTTTTCAGCTGAAAATAAACTTGGTGAAGGTGGCTTTGGACCTGTTTACAAGGGAAAGCTGTTGAATGGGGATGAGGTAGCTGTAAAAAGGTTGTCTAAAAGATCAGGCCAGGGATGGGATGAGTTAAAAAATGAAGCAATGCTCATTGCAAAACTCCAACACAACAACCTTGTTAGGCTTTTAGGCTGCTGCATTGAACGAGATGAAAAGATGCTAATTTATGAGCTTATGCCAAATAAAAGCTTGGACTTTATCCTTTTTGATGCCTCTAAAAGCATGATGCTAGATTGGGAAACTAGAGTTCGAATAATTGAGGGGATAGCCCAAGGTCTTCTCTATCTTCATCAGTATTCAAGGTTAAGGATCATTCACAGAGATTTAAAAGCTAGCAACATACTGTTGGATATCGAAATGAATCCAAAAATATCAGATTTTGGAATGGCAAGAATGTTTGGTGGAAATGAAGTACAAGCAAATACGAACCGGATAGTTGGGACATATGGCTACATGTCCCCTGAATATGCTTTAGAAGGCCTTTTTTCGGTAAAATCGGATGTGTTCAGCTTTGGAGTCCTTTTCTTAGAGATTATGACAGGCAAAAAGAACACTGGTTTTTATAACATGAATTCCCTCAATCTTCTTGGATATGCATGGGGTCTATGGACAAGTGGTAGAACAATAGAAATGATGGATCCTGTGCTAAAAGAGGCCTCCAAAATGCAAAATTTGATGATAAGATATGTGAACATAGCATTCCTTTGTGTTCAAGAATATCCAGCTGATAGACCTGTCATGTCTGATGTTGTATCCATGCTTAGCAATGAAAGTGTTGTTTTGCCTTGTCCTAAACCACCTGCATTTCTAAATATGAGAGGTACCAAGATTTCAAGCTCAGTTGGAAGTTCCACAGAAAATGTTTCTGTGAATATCATGTCAGCCACTATTATGCAAGCAAGATAA 2550 0.3878 MKLQDSSFGLFNLLIMLSLTLLQSTDAITYNETLQMGQSIRISDTIVSAKGNFELGFFTEENSTEYFVGTWFKKIPGKKIVWVANRNHEFTDSSAILTVYNDGNLVIMQDELLYFVTNISSKSNSTSTHAMLLDSGNLVLLDDLTLEILWQSFNYPTHTLLPGMNIGVDSVSGYPWSLISWTSANDPHPGIFSLEVVENLNSWLLVIKRNSDKYWIGDQLSNFTLGSFERNSNAFMDKLRGTFFITWQGEYGSLLVLEVSGDLNQLSWSDNDKQWISIQSSKCGTRGLCGNFGVCNPQAMITCDCVPGFEPNDSSSGIEGNTSAGCKRKKPLLCSNTSSDGSTDGFKLIKAVEFLTNDLFVLNTSNALVCQRTCYENCSCLAYAYNSQSECLLWYDHVLDLKNISVDAGYADNQFPSFFLKLAASEIKDELNPGNNLGYKSNNSSKKLSKIGIISVAVAAMLILGLFVYFYYKWKKLRGSGEDLLLFDVGMGMKVESSDHNEADKIAKVDKREVKLPFFSFASVSSATDNFSAENKLGEGGFGPVYKGKLLNGDEVAVKRLSKRSGQGWDELKNEAMLIAKLQHNNLVRLLGCCIERDEKMLIYELMPNKSLDFILFDASKSMMLDWETRVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDIEMNPKISDFGMARMFGGNEVQANTNRIVGTYGYMSPEYALEGLFSVKSDVFSFGVLFLEIMTGKKNTGFYNMNSLNLLGYAWGLWTSGRTIEMMDPVLKEASKMQNLMIRYVNIAFLCVQEYPADRPVMSDVVSMLSNESVVLPCPKPPAFLNMRGTKISSSVGSSTENVSVNIMSATIMQAR 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0482 849 CDD B_lectin 38 156 IPR001480 -
Lal9g0482 849 SMART blect_4 37 156 IPR001480 -
Lal9g0482 849 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 187 IPR036426 -
Lal9g0482 849 Pfam D-mannose binding lectin 80 181 IPR001480 -
Lal9g0482 849 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 24 847 - -
Lal9g0482 849 PIRSF SRK 5 849 IPR024171 GO:0004674
Lal9g0482 849 Pfam PAN-like domain 341 400 IPR003609 -
Lal9g0482 849 ProSiteProfiles Bulb-type lectin domain profile. 31 153 IPR001480 -
Lal9g0482 849 Coils Coil 849 849 - -
Lal9g0482 849 Pfam S-locus glycoprotein domain 232 312 IPR000858 GO:0048544
Lal9g0482 849 Gene3D - 26 154 IPR036426 -
Lal9g0482 849 Pfam Protein tyrosine and serine/threonine kinase 533 802 IPR001245 GO:0004672|GO:0006468
Lal9g0482 849 ProSitePatterns Serine/Threonine protein kinases active-site signature. 652 664 IPR008271 GO:0004672|GO:0006468
Lal9g0482 849 CDD PAN_AP_plant 331 423 - -
Lal9g0482 849 Gene3D Phosphorylase Kinase; domain 1 505 606 - -
Lal9g0482 849 SMART serkin_6 531 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g0482 849 SUPERFAMILY Protein kinase-like (PK-like) 514 827 IPR011009 -
Lal9g0482 849 Gene3D Transferase(Phosphotransferase) domain 1 607 808 - -
Lal9g0482 849 CDD STKc_IRAK 537 802 - -
Lal9g0482 849 SMART ntp_6 341 414 IPR003609 -
Lal9g0482 849 ProSiteProfiles PAN/Apple domain profile. 334 423 IPR003609 -
Lal9g0482 849 ProSiteProfiles Protein kinase domain profile. 531 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g0482 849 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 ISOFORM X1 24 847 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0482 Lal-Chr9 3240469 3244325 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0482 508 822 Receptor kinase-like Gene Family AT4G23250 58.567 5.21e-123 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lal9g0482 PK_Tyr_Ser-Thr 9.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0482 - - lang:109355122 1431
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0482 9 3240469 3244325 Lal9g0482 9 3240469 3244325 ECH