Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0481 ATGTTAAGGTACTTAAGGTTGTGTAGCAGTGATCTAAAAAACATAAAAATGGTTATTCATCATATGTTTATGTTTGTTATTTTCAATCTCTTGTTCTTCTCAAAAATCTACTCTGCAACAGATACCATTACACAGCTTCAATCACTTCCTGATGGAAACACTTTGGTTTCAGAAGATGGAAGCTTTGAGTTGGGTTTCTTCAAGCCAGGTACATCTTCAAACCGTTATGTAGGAATATGGTACAAAACTATACCAGTAAAGGAAAAAACTGTTGTTTGGGTTGCCAATCGTGACAACCCAATCAAAGATAACTCTAGTATGTTAAGCATAGATAAAGAGGGTACCCTTGTTCTTCTAAACCAGAACAACACTGTTCTTTGGTCAACAAACACTACAGAAAAGGCTTTCAACGTTGTAGCACAGCTCTTAGGTACAGGGAACTTGGTTCTAAGAAATGAGAATGACAAAAATCCTGAAAACTACTTGTGGCAGAGTTTTGATTATCCATCTGATACTATGTTATCAGGAATGAAAATTGGATGGAACTTCAAGACTGGTCTTAATAGGCGTTTAATAGCATGGAAAAACTGGGATGACCCTTCTTTAGGAGAGTTAACATGGGGTATGATACCTACTAATAATCCTGAAGCAATGATGTGGAAGGGATCAAAAGAGTTCTATAGGAGTGGCCCTTCAGCTGGCACACAATTCAGTGGTTTACCAAGTTTAGTGCCAAATTCAGTGTTGAATTATACATTTGTGTCCAACCAAGATGAATTGTACTTCTCACATAGCATCATTGATAAGTCAGTAATTGTTAGAGTGGTGTTGAACCAAACAGAATCTGCTGCTAAACGTTTAACATGGAATAATGATACTGAAACATGGGGGTTGTCTTCAATTATTCCAGTAGATTACTGTGATAACTATAATCTTTGTGGTCCATTTGGTATCTGTGTCAGTGGTGAGGCACCAATTTGTAGGTGTTTAGATGGGTTCAAACCAAAATCATTACAGAACTGGAATCAAGTGGATTTCACTGAAGGGTGTGTGCACAACCAAACTTGGAGCTGTAGGGATAAGAATAAAGATAGTTTCATCAAACTCAGTAACATGAAGGGGCCAGATACTACAAGATCATGGCTTAATGAAAGTATGACACTAAGGGAATGTAGGACTAAATGCTGGGAAGATTGTTCTTGTACAGCTTTTTCAAATACAGGAATCAAGGGACTTGGTCATGGCTGTTCCATTTGGTTTGGTGATTTGCTGGATGTGAGAAAGATCTCAAATAGTGGACAAGATTTATATATTAGAGTGGCTGTCTCAGAAACAGAACATGAAGATGCTGTAGGTGATTCAAAGAAGAATGAGGTTATGATTGGAAGCACCGTTTCATCTATTTTTGTGATGCTTTTAATTTTCACTCTCATATATAGGAAGAGAAAATATAGAATTAAAGGGACCTTAACATGGACAAGGGAAAATGACGTTGAAAGCAAACAAGAAGATTTAGATATACCTCTGTTTGATCTTGCTTTAATAAAGCATGCAACAAATGACTTCTCAAGTTACAATAAGCTTGGTGAAGGTGGGTTTGGTCCTGTATACAAAGGAACACTACCAGATGAACAAGAGATTGCTGTCAAGAGACTTTCACAGACATCTGGGCAAGGATTAAAGGAATTTATGAATGAGGTTGTGTTATGTGCAAAGCTTCAACACCGAAATCTTGTTAAAGTCCTTGGTTGTTGCATTGAAGAAGATGAGAAAATGCTTATATATGAATTCATGGCCAACAAAAGCCTAGATTTCTTTCTTTTCGATTCTGATCAAAGCAAACTTTTGAAATGGCCTACACGCTTTTACATTATATGTGGAGTTGCTCGAGGACTACTTTACCTACATCAAGATTCAAGATTAAGAATCATACACAGAGATCTTAAGGCAAGTAATATTTTATTAGACAATGAGATGAACCCAAAAATTTCAGACTTTGGTTTGGCCAGAATGTGCGGAGGTGATCAAATAGAAGGAAAAACGAGTAGAGTAGTTGGTACATATGGCTATATGTCTCCTGAGTATGCTTATGATGGGTTATTCTCCATCAAATCTGATGTTTTTAGCTTTGGCATACTATTGTTAGAAATAGTGAGTGGCAAGAAAAACACTGGACTCTCAATTCCAGATCATAGTCTTAATCTCATTGGACATGCATGGAGGCTATGGAAAGATGGGGTGGCAATGCAATTGATTGATGATTGTTTAAAGGAATCATGTGTTGTTCCTTGTGAAGCCTTGAGGTGCATTCATATTGGTCTTTTATGTGTGCAACATCAACCTAATGATAGGCCAGACATGGCATCAGTGGTTACTATGTTGAGTAGTGAGAGTGCTTTGCCTCAACCAAAAGAGCCTAGTTTTTTAATAAAAAGGACTCCAATTAAGGATCATTATGTTCAGCACCACACTTGGTGTTCAACAAATGAAGTCACTATCTCAATATTGAATGCAAGATAG 2520 0.3714 MLRYLRLCSSDLKNIKMVIHHMFMFVIFNLLFFSKIYSATDTITQLQSLPDGNTLVSEDGSFELGFFKPGTSSNRYVGIWYKTIPVKEKTVVWVANRDNPIKDNSSMLSIDKEGTLVLLNQNNTVLWSTNTTEKAFNVVAQLLGTGNLVLRNENDKNPENYLWQSFDYPSDTMLSGMKIGWNFKTGLNRRLIAWKNWDDPSLGELTWGMIPTNNPEAMMWKGSKEFYRSGPSAGTQFSGLPSLVPNSVLNYTFVSNQDELYFSHSIIDKSVIVRVVLNQTESAAKRLTWNNDTETWGLSSIIPVDYCDNYNLCGPFGICVSGEAPICRCLDGFKPKSLQNWNQVDFTEGCVHNQTWSCRDKNKDSFIKLSNMKGPDTTRSWLNESMTLRECRTKCWEDCSCTAFSNTGIKGLGHGCSIWFGDLLDVRKISNSGQDLYIRVAVSETEHEDAVGDSKKNEVMIGSTVSSIFVMLLIFTLIYRKRKYRIKGTLTWTRENDVESKQEDLDIPLFDLALIKHATNDFSSYNKLGEGGFGPVYKGTLPDEQEIAVKRLSQTSGQGLKEFMNEVVLCAKLQHRNLVKVLGCCIEEDEKMLIYEFMANKSLDFFLFDSDQSKLLKWPTRFYIICGVARGLLYLHQDSRLRIIHRDLKASNILLDNEMNPKISDFGLARMCGGDQIEGKTSRVVGTYGYMSPEYAYDGLFSIKSDVFSFGILLLEIVSGKKNTGLSIPDHSLNLIGHAWRLWKDGVAMQLIDDCLKESCVVPCEALRCIHIGLLCVQHQPNDRPDMASVVTMLSSESALPQPKEPSFLIKRTPIKDHYVQHHTWCSTNEVTISILNAR 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0481 839 Pfam Protein tyrosine and serine/threonine kinase 525 794 IPR001245 GO:0004672|GO:0006468
Lal9g0481 839 ProSiteProfiles PAN/Apple domain profile. 358 441 IPR003609 -
Lal9g0481 839 SUPERFAMILY alpha-D-mannose-specific plant lectins 91 200 IPR036426 -
Lal9g0481 839 Pfam S-locus glycoprotein domain 227 337 IPR000858 GO:0048544
Lal9g0481 839 SUPERFAMILY Protein kinase-like (PK-like) 507 820 IPR011009 -
Lal9g0481 839 Pfam PAN-like domain 358 426 IPR003609 -
Lal9g0481 839 ProSiteProfiles Bulb-type lectin domain profile. 40 163 IPR001480 -
Lal9g0481 839 Pfam D-mannose binding lectin 90 195 IPR001480 -
Lal9g0481 839 SMART serkin_6 522 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g0481 839 Pfam Domain of unknown function (DUF3403) 795 839 IPR021820 GO:0004674
Lal9g0481 839 CDD STKc_IRAK 528 794 - -
Lal9g0481 839 CDD B_lectin 47 169 IPR001480 -
Lal9g0481 839 PIRSF SRK 13 839 IPR024171 GO:0004674
Lal9g0481 839 Gene3D - 34 166 IPR036426 -
Lal9g0481 839 CDD PAN_AP_plant 357 441 - -
Lal9g0481 839 ProSitePatterns Serine/Threonine protein kinases active-site signature. 643 655 IPR008271 GO:0004672|GO:0006468
Lal9g0481 839 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 48 833 - -
Lal9g0481 839 Gene3D Transferase(Phosphotransferase) domain 1 598 805 - -
Lal9g0481 839 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 48 833 - -
Lal9g0481 839 SMART blect_4 46 169 IPR001480 -
Lal9g0481 839 SMART ntp_6 361 440 IPR003609 -
Lal9g0481 839 Gene3D Phosphorylase Kinase; domain 1 496 597 - -
Lal9g0481 839 ProSiteProfiles EGF-like domain profile. 303 339 IPR000742 -
Lal9g0481 839 ProSiteProfiles Protein kinase domain profile. 522 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0481 Lal-Chr9 3235532 3239188 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0481 468 814 Receptor kinase-like Gene Family AT4G23150 53.846 2.29e-122 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lal9g0481 PK_Tyr_Ser-Thr 5.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0481 - - gmx:100786696 1114.75