Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0480 ATGGCAGATGATAATCAATTTCAATCAAGTGGAAACTGGTGGGAATCATCAAGGAACATGAGGTTTGAAAGTGGGGATCAATCACAGTCTTCCTCATCTGGACTCACCAACATAGGTAACTTTTGTTGGCAGCAACAACAACATGACATGGTTGTGGATCACATGAAGCCAAGGTCTGATTCTTCCATGGAAGGAACTACTTCTGTGCAGGTTTTCCATGATAAGCTTCAACAACAACAACAAGATTCTTGTGCCACTAATTCCACAAATGACCACACCAACTTGCATATGATGGGTTTGGGACTTTCATCTCAAGCTATGGATTGGAATCAAGCATCTTTGCTAAGAGGTGAGAAAGCTTCAGAGAGCAGCTTCAGGTCCATGCTGCAAGAAAATTTGAGTTCATCAAACACTAATTTTCAGCATGAGACTGGGATTGGATTGTCTCAACAAGTTCAATGGAGACCAGAACCTTCTTCCACCAATGAATTCAAACAAGTGAATAGAGGTTTCTCTTTGGATCAAACTCAGTTTAGCCCTCAATATAGCTCTGGGGATAGTAACGTAACAAGCCAAGGTATACCCTCTACTTTTCACACGGATCATTACCCTTCAATGTTACAAGGATTATTGGGACCTGAAAGCAACCAACAAGGTTCATTTGAGAATATTCGACCAATGAGTTTTCCATATTCACCAAGTTATGGCTTGAACTCTAATGAGTTATTACCTTCTTGGCCTGCTTCTAAAGTTCCTCAGTTATTGAGAGCTTCACCTCCTAAACAACCACCTAATAGTAGCCAGTTGCATTTCACCAACAATGCTCCCTTTTGGAACGCTTCTGAGGCTCCTATTAAAGTTGCTCGATCCAGCTTCTTCCCATCATTGCAGCAACCATTTTCCACGCCAAGTTTTGATGTTCAGTCAAAGAATATATCTGAGGTTAGAGACTCGGGTGCTGTGATGAAGAAAAGTGGGAGTGAGCCTCCACCCAAAAGGCCCAGGAGTGAAACCCCATCTCCTTTGCCAGCTTTTAAGGTAAGAAAAGAAAAGATGGGAGACAGAATCACTGCACTACAACAATTGGTTGCGCCTTTCGGAAAGACTGATACAGCCTCAGTGCTATCTGAAGCCATTGAATACATCAAATTTCTCCATGAACAAGTGACTGTTTTAAGCACTCCATATATGAAAAGTGGAGTTCCCACACAGCATCAACAGAATTCTGGTAACTCTAAGGAAGGTGAGGGACCAAAGCAGGATCTTAGAAGCCGAGGGCTATGCTTGGTCCCAGTTTCTAGTACATTTCCAGTGACTCATGAACCCACAGTTGATTTTTGGACACCAACATTTGGAGGAACTTACAGATAA 1371 0.4223 MADDNQFQSSGNWWESSRNMRFESGDQSQSSSSGLTNIGNFCWQQQQHDMVVDHMKPRSDSSMEGTTSVQVFHDKLQQQQQDSCATNSTNDHTNLHMMGLGLSSQAMDWNQASLLRGEKASESSFRSMLQENLSSSNTNFQHETGIGLSQQVQWRPEPSSTNEFKQVNRGFSLDQTQFSPQYSSGDSNVTSQGIPSTFHTDHYPSMLQGLLGPESNQQGSFENIRPMSFPYSPSYGLNSNELLPSWPASKVPQLLRASPPKQPPNSSQLHFTNNAPFWNASEAPIKVARSSFFPSLQQPFSTPSFDVQSKNISEVRDSGAVMKKSGSEPPPKRPRSETPSPLPAFKVRKEKMGDRITALQQLVAPFGKTDTASVLSEAIEYIKFLHEQVTVLSTPYMKSGVPTQHQQNSGNSKEGEGPKQDLRSRGLCLVPVSSTFPVTHEPTVDFWTPTFGGTYR 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0480 456 SMART finulus 347 391 IPR011598 GO:0046983
Lal9g0480 456 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 9 445 - -
Lal9g0480 456 MobiDBLite consensus disorder prediction 398 422 - -
Lal9g0480 456 PANTHER TRANSCRIPTION FACTOR BHLH123-LIKE ISOFORM X1 9 445 - -
Lal9g0480 456 MobiDBLite consensus disorder prediction 314 344 - -
Lal9g0480 456 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 336 385 IPR011598 GO:0046983
Lal9g0480 456 MobiDBLite consensus disorder prediction 176 225 - -
Lal9g0480 456 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 346 399 IPR036638 GO:0046983
Lal9g0480 456 CDD bHLH_AtbHLH_like 342 393 IPR045239 -
Lal9g0480 456 MobiDBLite consensus disorder prediction 176 203 - -
Lal9g0480 456 MobiDBLite consensus disorder prediction 398 415 - -
Lal9g0480 456 Gene3D - 346 405 IPR036638 GO:0046983
Lal9g0480 456 MobiDBLite consensus disorder prediction 210 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0480 Lal-Chr9 3229130 3232755 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0480 116 456 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 46.253 1.54e-74 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0480 - - lang:109352127 807.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0480 9 3229130 3232755 Lal9g0480 9 3229130 3232755 ECH