Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0471 ATGGTCCCAAAAAACCAGAACTTGACTCCATTTTCACTCACGTCAACACCTTCAACCCCTTCAAAGAACTGTGTGAGTGATGAACTTTTCATAGACCAAGAGCAACAATTTGGAGGTGAAAAAATGGTGGAGAGTCCAATTAATGAAAGAACAAGACTAGCTTTTACACTTGTAAATGGTGGCTACGATGTTAGCCCAAGTAGTGTAACACCAAGCAATGCTGGATCAGATTGTGGTATAGTAGAGTTCACGAGAGAGGATGTAGAAGCATTGCTAAATGAGAAAGCCAAAAGAAAAGACAGATTTAATTACAAGGAAAGATGTGAAAATATGATGGACTATATAAGAAGGGTTAAGGTTTGCATTAAATGGTTCCAAGAACTTGAGATGAACTACTCACTAGAGCAGGAAAGGTTAAAGAATTCATTGGAATTAACCCAACACAAATGCTCCGAAATTGAGTTGCTGCTTAAAATGAAGGAAGAAGAACTAAATTCAATTATCACAGAAATGAGAAGGAATGGTGCTTCTTTGCAAGAGAAATTGACTAAGGAAGAATCAGAAAGGATGGTTGCAGTGGAATCTCTTCAAATAGAGAGGGAGGCAAGGCTGAACATTGAGAGGTCACATATTACTTTGTCAGAGGACCTTGGCAAAGCTCAACGAGAGATCGAAAATGCAAATCAGAAGATATCTTCACTCAATGACATGTATAAACAATTACAAGATTACATAATAAGCTTACAACAGTACAACGGAAAGCTACATACAGAGCTTTCATCTGTTGAAGATGAAATTAAACGCGTAGAGAAAGAGAAGGCTGCTGCATTGGAGAACATCACCATGTTAAAGAGTCAACTTACTTTGTCCATTTCTTCTCAAGAGGCTGCCATAAAACAGAAGGAAACTCTGGCTAGTGAAGTTGCTTCTCTTAGAGGAGAATTGCAACAAGAAAGAGATGAACGGGACCACCAATTATCTCAAGTGCAAACTTTAACTTTTGAATTAGAGAAATTTAAGAAAACCGCAGAAAGCTCATGCACTGAACTGGACAACTTGAAGTTAAAAGCAAATGAACTAGAGGCAAAATGTTCTTTGAAAGATAATCAAATAAGGGAATTGCAAGGGCAGCTACCAATTGCGAAGAAATTTCAGGAGCTTGGTATATCTGCACTCGAGACAAGGACGGAATTTGAAGGAAGACAGAAATTTGTAGATGAGTTACAAAGACGTGTCGCTGATGCAGAATTAAAAGTTATAGAAGGGGAGAGGCTGCGGAAAAAATTACATAATACCATTTTGGAGCTAAAAGGGAATATCCGTGTATTCTGTCGAGTGAGGCCTTTGTTACCTGATGAAAGTTGTATCACAGAAGGCAAAAAATTTAGTTATCCAACATCGATGGAAGCTTATGGACGAGACATTGATCTAACCCAAAGCAGCCAAAAACATTCTTTTACATTCGATAAAGTTTTTACACCAGAGGCATCACAAGAAGAAGTTTTTGTAGAAATATCACAGCTTGTACAAAGTGCTCTTGATGGTTATAAGGTTTGCATCTTTGCCTATGGTCAGACTGGATCAGGTAAAACCTATACAATGATGGGGAGGCCTGGACATCCAAAGGAAAAGGGCTTGATACCTCGTTCGTTAGAACAAATATTTCAAGCAAAGCAGTCACAACAACCTCAAGGTTGGAAATATGAAATGCAGGTGTCAATGTTGGAAATATACAATGAAACCATCCGTGATCTGTTATCTTCAAACAGATTATCATCTGAGGCAACTCGCCTAGAAAATGGCACTCCTGGAAAACAATACACAGTCAAACATGATACAAGTGGAAATACACACATTTCTGATCTTACTGTAGTGGATGTTCAGAGTATTGAAGAGGTCGAATTTCTTTTAAGTCAAGCTGCAAATAGCAGATCAGTGGGAAAAACCCAGATGAATGAACAATCCTCAAGAAGCCATTTTGTATTCACTCTTCGAATATATGGGGTAAATGAGAGCACTGACCAACAAGTACAAGGCATCTTAAATCTTATTGATCTTGCCGGTAGCGAGCGTCTTTCGAAGAGTGGGTCAACCGGAGACAGGTTAAAAGAAACTCAAGCAATCAACAAAAGTTTATCATCATTAAGTGATGTTATATCTGCCTTGGCCAAGAAGGAAGATCATGTGCCATTCAGGAACTCAAAGCTAACATATCTACTACAGCCTTGTCTGGGTGGTGACTCAAAGACATTAATGTTTGTAAACATCTCACCTGATCCAACTTCAGTTGGTGAGTCACTATGCTCACTGAGGTTTGCATCAAGGGTTAATGCTTGTGAGATTGGAACGCCGCGACGTCAAACGAATTGGCGTTTATCAGACTCTGGTTAG 2391 0.3898 MVPKNQNLTPFSLTSTPSTPSKNCVSDELFIDQEQQFGGEKMVESPINERTRLAFTLVNGGYDVSPSSVTPSNAGSDCGIVEFTREDVEALLNEKAKRKDRFNYKERCENMMDYIRRVKVCIKWFQELEMNYSLEQERLKNSLELTQHKCSEIELLLKMKEEELNSIITEMRRNGASLQEKLTKEESERMVAVESLQIEREARLNIERSHITLSEDLGKAQREIENANQKISSLNDMYKQLQDYIISLQQYNGKLHTELSSVEDEIKRVEKEKAAALENITMLKSQLTLSISSQEAAIKQKETLASEVASLRGELQQERDERDHQLSQVQTLTFELEKFKKTAESSCTELDNLKLKANELEAKCSLKDNQIRELQGQLPIAKKFQELGISALETRTEFEGRQKFVDELQRRVADAELKVIEGERLRKKLHNTILELKGNIRVFCRVRPLLPDESCITEGKKFSYPTSMEAYGRDIDLTQSSQKHSFTFDKVFTPEASQEEVFVEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPGHPKEKGLIPRSLEQIFQAKQSQQPQGWKYEMQVSMLEIYNETIRDLLSSNRLSSEATRLENGTPGKQYTVKHDTSGNTHISDLTVVDVQSIEEVEFLLSQAANSRSVGKTQMNEQSSRSHFVFTLRIYGVNESTDQQVQGILNLIDLAGSERLSKSGSTGDRLKETQAINKSLSSLSDVISALAKKEDHVPFRNSKLTYLLQPCLGGDSKTLMFVNISPDPTSVGESLCSLRFASRVNACEIGTPRRQTNWRLSDSG 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0471 796 SMART kinesin_4 437 787 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal9g0471 796 MobiDBLite consensus disorder prediction 1 20 - -
Lal9g0471 796 Coils Coil 252 286 - -
Lal9g0471 796 PANTHER KINESIN-LIKE PROTEIN 25 795 - -
Lal9g0471 796 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 399 777 IPR027417 -
Lal9g0471 796 ProSiteProfiles Kinesin motor domain profile. 439 779 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal9g0471 796 Gene3D Kinesin motor domain 384 781 IPR036961 -
Lal9g0471 796 Coils Coil 343 377 - -
Lal9g0471 796 Coils Coil 405 425 - -
Lal9g0471 796 Coils Coil 210 244 - -
Lal9g0471 796 Coils Coil 168 188 - -
Lal9g0471 796 CDD KISc_C_terminal 437 781 - -
Lal9g0471 796 Coils Coil 301 321 - -
Lal9g0471 796 Pfam Kinesin motor domain 445 777 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal9g0471 796 PRINTS Kinesin heavy chain signature 515 536 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal9g0471 796 PRINTS Kinesin heavy chain signature 649 666 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal9g0471 796 PRINTS Kinesin heavy chain signature 680 698 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal9g0471 796 PRINTS Kinesin heavy chain signature 729 750 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal9g0471 796 PANTHER KINESIN-LIKE PROTEIN KLP-3 25 795 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0471 Lal-Chr9 3126849 3132363 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0471 415 776 Calmodulin-binding Proteins AT5G65930 41.209 2.40e-80 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0471 K10405 - gmx:100784221 1235.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0471 9 3126849 3132363 Lal9g0471 9 3126849 3132363 ECH
Lal1g0541 1 3471433 3477381 Lal9g0471 9 3126849 3132363 LSH
Lal10g0645 10 14286143 14294996 Lal9g0471 9 3126849 3132363 PCT
Lal8g0868 8 6305841 6312859 Lal9g0471 9 3126849 3132363 PCT
Lal9g0471 9 3126849 3132363 Lal10g0645 10 14286143 14294996 PCT
Lal9g0471 9 3126849 3132363 Lal8g0868 8 6305841 6312859 PCT