Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0458 ATGATGTCCAGATCGTATACAAATCTTTTAGATTTGGCTTCCGGGGATTTCCCGAATATGGGGAATCAGCCTAAGGAAAGGAGGAGGATGTCGAGAGTTATGAGTGTTCCTGGGATTATCTCAGAACTGGATGATGATCAGGCAGTTAGTGTTTCTTCTGATAATCCATCAACAATTTCTACTGATCGAATGATCATTGTAGCGAACCAGCTACCTTTGAAAGCAAAGCGTAGGGAGGACAATAAAGGGTGGAGTTTCAGTTGGAATGAGGATTCATTGCTTTTACAGCTTAAGGATGGACTTCCAGACGAGATGGAAGTTTTGTATGTAGGGTCTCTGCGTGTTGATATTGACCCGGCTGAACAGGATGATGTGTCACAGTATTTGTTGGACAAATTCAAGTGCGTCCCTACTTTTCTACCACCTGATGTTTTGGAGAAATTTTATGATGGTTTCTGTAAAAGGCAGTTATGGCCACTTTTTCATTATATGTTACCGTTTACAACCAATAAAAGCCATCGTTTTGATCGCTCTTTGTGGGAAGCCTATGTACTGGCAAATAAGCTTTTCTTTCAAAAGGTAGTTGAAATAATAAACCCAGAGGACGATTATATTTGGGTTCATGATTATCATTTGATGGTGCTGCCAACCTTTATAAGAAGGCGCTTTAACAGGGTTAAAATGGGATTTTTCTTGCACAGCCCCTTTCCATCATCAGAGATATATAGGACTCTTCCTGTTAGGGAAGAGTTACTGAAAGCTTTACTTAACTCTGATATCATTGGATTCCATACCTTTGACTATGCTCGTCATTTCCTTTCCTGTTGCAGTCGTATGTTGGGTTTGGAGTACCAGTCAAAGAGGGGCTATTTAGGATTGGAATATTATGGAAGGACTATCAGTATTAAGATTATGCCCGTTGGGATTCACATGGGTCGAATAGAATCTGTTATGAGAATGGCTGATGAGGAGTCCAAGGCAAGGGAGATAAAACAACAATTCGAAGGAAAAACCATCTTGCTTGGTGTTGACGATATGGACATTTTTAAAGGCATAAATTTGAAGATTTTGGCTATGGAGCAGATGCTCAGACAACACCCAAAATGGCAAGGAAGAGCTGTTCTCATCCAGATAGTTAACCCTGCTAGGGGTAAAGGGATACATCTAGAGGAGATACATGCTGAAATACAAGAAAGCTGCGGCAGGATCAACAGAGTATTTGGGCGACCTGGTTATGAACCTGTTGTTTTTATTGATAGATCGGTTTCAATTGCAGAAAAAGTTGCATATTACAGCATGGCTGAGTGTGTTATCGTCACGGCCGTACGGGATGGAATGAACCTAACTCCTTATGAATATATTGCTTGTAGACAGGGAATATCTGGTTCTGAATCATGTTCCAATGTCAGCAGTCCAAAGAAGAGTATGTTAGTAATATCTGAGTTTATTGGATGTTCTCCATCACTTAGTGGTGCTATCCGAGTCAATCCATGGAATGTTGAAGCAACTGCAGAGGCAATGAATGAGGCCATATCAATGAGTGAAGGAGAGAAACAGTTAAGGCATGAAAAGCATTACCGATATGTCAGCACTCACGATGTGGCTTACTGGTCTCGTAGTTTCTTGCAAGACATGGAGAGGGCTTGCGCAGACCTTCTAAGAAAAAGATGTTGGGGAATAGGTCTTAGCTTTGGATTTAGGGTTGTGGCACTTGACCCTAATTTTAAAAAGCTCTCAATTGATACCATGGTTGCAGCTTACATGAGGGCAAGGAGTAGGGCCATTTTGTTGGACTATGATGGTACCGTGATGCCACAAAATTCCATCAATAAAAGTCCTAGCAAGGAGGTTATCAATCTTTTGGAGACACTATGTGCAGACCCCAAAAATGTAGTTTTCATTGTTAGTGGAAGGGGGAGGGCTAGTTTAAGCGATTGGTTTACACCCTGCAAAAAACTTGGAATTGCTGCAGAACATGGGTACTTCATGAGATGGTCACAGAGTGAAGATTGGGAAATTTGTGGCAAGAGCACCGAGTTTGGATGGATGCAGATTGCTGAACCTGTAATGAAATTATATACAGAGGCAACTGATGGTTCTGGCATTGAGAAAAAGGAAAGTGCATTGGTCTGGCAATACCGGGATGCAGACCTTGGTTTTGGATCTGCTCAGGCTAAGGAAATGTTAGATCATCTAGAAAGTGTTTTAGCCAATGAACCTGTTGCTGCCAAGAGTGGCCAATTCATTGTTGAAGTGAAGCCCCAGGATGTGAGCAAAGGCTTAGTTGCTGAAAAGATATTTTCATCAATGGTTGAGAAGGGGAATCAAGCAGATTTTGTGCTGTGTGTTGGTGATGATAGATCAGATGAAGATATGTTTGAAGTAATTAGTAGTGCAGTCTCAAGAAATATTCTTTCTTCCAATGCTTCCGTTTTCGCTTGCACGGTTGGACAAAAACCAAGCAAAGCTAAGTATTATCTGGATGATACATTTGAAGTAATAAACATGCTGCAATCTTTGGCTGAAGAATCAGATTCTTCACCACCATGCATAGAACAAGAAACTGGGGATTCCTCTCTAAGGCAAATGTGA 2592 0.412 MMSRSYTNLLDLASGDFPNMGNQPKERRRMSRVMSVPGIISELDDDQAVSVSSDNPSTISTDRMIIVANQLPLKAKRREDNKGWSFSWNEDSLLLQLKDGLPDEMEVLYVGSLRVDIDPAEQDDVSQYLLDKFKCVPTFLPPDVLEKFYDGFCKRQLWPLFHYMLPFTTNKSHRFDRSLWEAYVLANKLFFQKVVEIINPEDDYIWVHDYHLMVLPTFIRRRFNRVKMGFFLHSPFPSSEIYRTLPVREELLKALLNSDIIGFHTFDYARHFLSCCSRMLGLEYQSKRGYLGLEYYGRTISIKIMPVGIHMGRIESVMRMADEESKAREIKQQFEGKTILLGVDDMDIFKGINLKILAMEQMLRQHPKWQGRAVLIQIVNPARGKGIHLEEIHAEIQESCGRINRVFGRPGYEPVVFIDRSVSIAEKVAYYSMAECVIVTAVRDGMNLTPYEYIACRQGISGSESCSNVSSPKKSMLVISEFIGCSPSLSGAIRVNPWNVEATAEAMNEAISMSEGEKQLRHEKHYRYVSTHDVAYWSRSFLQDMERACADLLRKRCWGIGLSFGFRVVALDPNFKKLSIDTMVAAYMRARSRAILLDYDGTVMPQNSINKSPSKEVINLLETLCADPKNVVFIVSGRGRASLSDWFTPCKKLGIAAEHGYFMRWSQSEDWEICGKSTEFGWMQIAEPVMKLYTEATDGSGIEKKESALVWQYRDADLGFGSAQAKEMLDHLESVLANEPVAAKSGQFIVEVKPQDVSKGLVAEKIFSSMVEKGNQADFVLCVGDDRSDEDMFEVISSAVSRNILSSNASVFACTVGQKPSKAKYYLDDTFEVINMLQSLAEESDSSPPCIEQETGDSSLRQM 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0458 863 TIGRFAM T6PP: trehalose-phosphatase 590 841 IPR003337 GO:0003824|GO:0005992
Lal9g0458 863 SUPERFAMILY HAD-like 593 841 IPR036412 -
Lal9g0458 863 MobiDBLite consensus disorder prediction 844 863 - -
Lal9g0458 863 Gene3D Glycogen Phosphorylase B; 317 530 - -
Lal9g0458 863 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE (UDP-FORMING), TREHALOSE-PHOSPHATASE-RELATED 1 852 - -
Lal9g0458 863 Gene3D - 592 693 IPR023214 -
Lal9g0458 863 Gene3D - 721 849 IPR023214 -
Lal9g0458 863 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 63 549 - -
Lal9g0458 863 Pfam Glycosyltransferase family 20 63 546 IPR001830 GO:0003824|GO:0005992
Lal9g0458 863 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 852 IPR001830 GO:0003824|GO:0005992
Lal9g0458 863 Pfam Trehalose-phosphatase 596 829 IPR003337 GO:0003824|GO:0005992
Lal9g0458 863 Gene3D Glycogen Phosphorylase B; 56 316 - -
Lal9g0458 863 CDD GT20_TPS 63 546 IPR001830 GO:0003824|GO:0005992
Lal9g0458 863 CDD HAD_TPP 594 835 - -
Lal9g0458 863 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 595 799 IPR006379 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0458 Lal-Chr9 3009683 3021827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0458 1 847 Trehalose Biosynthesis Gene Families AT1G06410 76.978 0.0 1377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0458 K16055 - gmx:100800847 1593.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0458 9 3009683 3021827 Lal9g0458 9 3009683 3021827 ECH