Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0454 ATGGAAATGGAAGCTTTTGAGTGGGGATCTGGGTCTTATAAGAGAGTTATTAATGAAGGGTTTGAGGTGAATAACCCTGCTATAATGGGAAGTGGGTATGGTTCATCTTTGTCTTTGGTTTTGGATAGGGAAAAAAAGGAACTTGTGGAAGCACCTGTCAAATTAGAACGCAAGGGTGTGTCCACTGAGAGAAGCATTGAAGCATTGAAGAATCATAGTGAAGCAGAGAGGAATAGAAGATCAAGGATTAATGCACAGCTTGATACACTTCGTGCTGTGATTCCTGGTGCTATCAAGATGGATAAAGCATCTTTACTTGCTGAGGTTATTGGACACTTGAAAGAGTTGAAAAGGAATGCAGGACAAGCTTGTGAAGGTTTAATGATACCGAAGGACGTCGATGAAATAAGAGTCGAAGAACATGAGGGTGGTTTGAATGGTTTTCGATATTCGATTAAGGCATCTCTATGTTGTGAATATAAACCTGGACTATTGTCTGATATAAGACAAGCACTAGATGCTCTTCATCTTATGATAATGAAGGCAGATATTGCAACATTGGGAGACAGAATGAAGAATGTCTTTGTGATAATTAGCTGCGAAGAGCAGAATTTTGAAGATGCCGAATACCGTCAATTTCTCGCTGGCTCTGTTCACCAAGCTCTTAGGTCTGTACTAAATAGATTTTCTGTTTCACAAGACTTCTTAGGAACCAGAAAGAGAAGGAGGATTTCTATATTTTCATCATCTCTAGAAGATTTATTGTAA 768 0.3893 MEMEAFEWGSGSYKRVINEGFEVNNPAIMGSGYGSSLSLVLDREKKELVEAPVKLERKGVSTERSIEALKNHSEAERNRRSRINAQLDTLRAVIPGAIKMDKASLLAEVIGHLKELKRNAGQACEGLMIPKDVDEIRVEEHEGGLNGFRYSIKASLCCEYKPGLLSDIRQALDALHLMIMKADIATLGDRMKNVFVIISCEEQNFEDAEYRQFLAGSVHQALRSVLNRFSVSQDFLGTRKRRRISIFSSSLEDLL 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0454 255 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 1 251 - -
Lal9g0454 255 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 71 120 IPR036638 GO:0046983
Lal9g0454 255 SMART finulus 73 122 IPR011598 GO:0046983
Lal9g0454 255 Pfam Helix-loop-helix DNA-binding domain 71 116 IPR011598 GO:0046983
Lal9g0454 255 PANTHER TRANSCRIPTION FACTOR BHLH30 1 251 IPR045847 GO:0003700|GO:0006355
Lal9g0454 255 Coils Coil 66 86 - -
Lal9g0454 255 CDD ACT_UUR-ACR-like 155 226 - -
Lal9g0454 255 Gene3D - 62 123 IPR036638 GO:0046983
Lal9g0454 255 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 67 116 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0454 Lal-Chr9 2983315 2985703 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0454 54 245 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 40.816 2.14e-32 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lal9g0454 HLH 5.1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0454 - - gmx:100784966 370.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0454 9 2983315 2985703 Lal9g0454 9 2983315 2985703 ECH