Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0448 ATGGCACAATTGCCACCAAAGATTCCAAACTTGGGACCAAGTTGGCCAGAATTCTCTTCTCACCAAAGGATGCCTTCTCTTACAAGCATGCTACAAAATGCTGCAAACAATAACCATCAACATCATCTTCAACAACAAAACAATCCTTCATGGGTGGATGAGTTCTTGGACTTCTCCTCGGCTCGGCGTGGGGCCCACCGGAGATCGGTGAGTGACTCCATCACCTTCCTGGAGGCGCCAAAGGGTGATGATGATGATCACATCCAGTTTGAGAGGTTTGACGATGAACAATTCTTGTCCATGTTCAATGATGAGGTTTCTGTGAATCATACCATGATGCTACCAACAACAACATTATCCTCCTCAAACCCTTCTAGCCCTTCTGATCATAACAGCATCAATGATGAACACAAAGAAACAACAAACAAAGAAAAGGAGCAAGAGGAGAAGGAACAGCAGCACCAGCAGAATGGATTGAAGAATGAATCGGAGGATGAGGATGAAAATCAATGCAAACAGGAAATCACAGAAGGTCCCAATAATGATAATGCAAATGCAACTTGTTCCAATGATAGAATCACTGACCCAAAGAGGGTCAAAAGAATCTTGGCAAATAGACAATCTGCACAAAGATCTAGAGTAAGGAAACTGCAGTACATATCAGAACTTGAACTAAATGTAACTTCATTACAGGCCGAAGTTTCAGTATTGTCTCCACGAGTTGCATTTTTGGATCATCAACGTTTGCTTCTAAATGTAGATAACAGTGCTCTCAAGCAAAGAATCGCTGCTTTGGCCCAAGATAAGATATTCAAAGATGCTCATCAAGAGGCACTGAAAAGTGAGATAGAGAGACTGAGGCAAGTGTACCATCAACAAAACATAAAGAAGATGGACAATGCTGCAGGGTCAACATCACCTAAACCTATATGTGATACTCAGACTGAAAAGGAGCAGATAATAAATGTTTGA 972 0.4167 MAQLPPKIPNLGPSWPEFSSHQRMPSLTSMLQNAANNNHQHHLQQQNNPSWVDEFLDFSSARRGAHRRSVSDSITFLEAPKGDDDDHIQFERFDDEQFLSMFNDEVSVNHTMMLPTTTLSSSNPSSPSDHNSINDEHKETTNKEKEQEEKEQQHQQNGLKNESEDEDENQCKQEITEGPNNDNANATCSNDRITDPKRVKRILANRQSAQRSRVRKLQYISELELNVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKSEIERLRQVYHQQNIKKMDNAAGSTSPKPICDTQTEKEQIINV 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0448 323 PANTHER BASIC LEUCINE ZIPPER 34 1 320 - -
Lal9g0448 323 Coils Coil 130 162 - -
Lal9g0448 323 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 200 215 IPR004827 GO:0003700|GO:0006355
Lal9g0448 323 MobiDBLite consensus disorder prediction 1 23 - -
Lal9g0448 323 MobiDBLite consensus disorder prediction 174 192 - -
Lal9g0448 323 CDD bZIP_plant_RF2 198 248 IPR044759 GO:0003700|GO:0006355
Lal9g0448 323 SMART brlzneu 193 257 IPR004827 GO:0003700|GO:0006355
Lal9g0448 323 MobiDBLite consensus disorder prediction 115 193 - -
Lal9g0448 323 Gene3D - 196 269 - -
Lal9g0448 323 Coils Coil 276 296 - -
Lal9g0448 323 MobiDBLite consensus disorder prediction 131 167 - -
Lal9g0448 323 Pfam bZIP transcription factor 197 241 IPR004827 GO:0003700|GO:0006355
Lal9g0448 323 PANTHER BZIP FAMILY TRANSCRIPTION FACTOR 1 320 - -
Lal9g0448 323 SUPERFAMILY Leucine zipper domain 197 251 IPR046347 GO:0003700|GO:0006355
Lal9g0448 323 MobiDBLite consensus disorder prediction 115 130 - -
Lal9g0448 323 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 195 247 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0448 Lal-Chr9 2947703 2951039 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0448 1 274 bZIP Transcription Factor Family AT3G58120 56.419 2.20e-98 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal9g0448 bZIP_2 1.7e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0448 - - lang:109363232 489.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0448 9 2947703 2951039 Lal9g0448 9 2947703 2951039 ECH
Lal2g0501 2 3008054 3011831 Lal9g0448 9 2947703 2951039 LSH