Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0447 ATGCAAGGAAACAATAAGGTGCTACATTCAGCATGTGCATCATGCAAGCATCAAAGAAAGAAATGCAATGAAAAGTGTATATTAGCACCTTATTTTCCATCAAGTAGAAGCTATGAGTTTGATGCTGTTCACAAGGTTTTTGGTGTGAGCAACATAACAAAGTTGGTGAAGAATGTTAGGGTTGAAGATAGAAGAATGATTGTGGATTCTTTAATATGGGAAGCATGTTGTAGGCAAAGGGATCCTATACAAGGCCCTTATGGAGAATATACAAAAATTTGCCATGAGTATGAGAAAGTGTTCACTGAACTCCAAATAATCAGAGATCAAAACCACCTAATAATGCAATTGCCATCACATCTGGGACTGAATTCTTCAGAGAAAAATGTGTTAAATTATCTCCATGGGAACAAGAATAATGTTATCATTGATTCTAACATTTATAAGAACCATTATTGCCCAGTTTTTGTGCAAGATTTGGAGTTAGAAAATATGAAACCAGAAGTTATCCCATCACTTCAGCAGCACTCTCAACCATACTATGTTACAGGTATCATTGATTCTTGA 567 0.3545 MQGNNKVLHSACASCKHQRKKCNEKCILAPYFPSSRSYEFDAVHKVFGVSNITKLVKNVRVEDRRMIVDSLIWEACCRQRDPIQGPYGEYTKICHEYEKVFTELQIIRDQNHLIMQLPSHLGLNSSEKNVLNYLHGNKNNVIIDSNIYKNHYCPVFVQDLELENMKPEVIPSLQQHSQPYYVTGIIDS 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0447 188 PANTHER LOB DOMAIN-CONTAINING PROTEIN 2 4 149 - -
Lal9g0447 188 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
Lal9g0447 188 Pfam Lateral organ boundaries (LOB) domain 11 107 IPR004883 -
Lal9g0447 188 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0447 Lal-Chr9 2945447 2946013 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0447 9 166 AS2 family AT1G06280 45.455 3.67e-41 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lal9g0447 LOB 9.8e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0447 - - lang:109354012 342.813
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0447 9 2945447 2946013 Lal9g0447 9 2945447 2946013 ECH
Lal2g0497 2 2993410 2994096 Lal9g0447 9 2945447 2946013 LSH