Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0443 ATGGAATCCCACAAACTGTTTGAAGCTCAAACACATATATTGCATCACACTTTCAGCTTCATAAACTCTATGTCCCTTAAGTGTGCAATTGATATGAGTATACCCGATGTTATACACAAATATGGCCAACCCATGCCACTCTCAATTCTCATTGCTTCACTACCAATCCACCCTTCCAAAACCAACTTCATTTACCGCTTGATGCGAATTTTGACACATTCTGGCTTCTTCTCTCAGTACATGAACAATCTTGAAGTGAGTTATGACCTAACTGATGCATCTAGACTATTGGTTAAGGATCATTCCTTTAGTGTGACACCTTTCGTGCTAATGGTACTTGATCCAACTTACTTAAGTCCGTGGAATCAATTTTCTAGTTGGTTCAAAAGTGGTGACCCTACACCGTTTTTCATGGAACATGGGGTGACACTTTATGATCATATTGACCAAGATCCCAAACACAATCACATGTTCAATGATGCCATGGCAAGTAACGCAAGACTGGTTTCAAGTATGGTGATTCAGAAATGCAAGGGAGTATTCAAGGGATTGAAGTCATTGGTTGATGTTGGGGGAGGCACAGGGACAATGGCTATGGCTATTGCTAAGTTATTCCCACAATTGGATTGCATTGTATTTGATCTCCCTCATGTTGTTGCTGGCTTGCAAGGAAGTGACAAGAACCTTAAATATGTTGGTGGGGACATGTTTGAGGCAATTCCACCCGCAGATTCCATTTTGTTGAAGTGGATATTGCATAACTGGAATGACGAGGAATGTGTGAAAATGCTGAAGAAATGTAAGGAGGCAATAACGAGGGAAGGCAAAGAAGGAAAGGTTATTATTATAGACATGGTGATGATGGAGAATGAGAATGTCGTAGATGATGAATCAGTGGAAACAAAATTGTTCTTTGATTTGCAAATGATGGTGTTTTTCAATGCAAAAGAGAGAAATGAGAAAGAATGGGCCAAGCTGTTTTTCTCTTCTGGTTTCACTAACTATAAAATAACTCCACTTCTGGGTTTGAACTCTCTCATTGAGGTTTATCAATAA 1056 0.3949 MESHKLFEAQTHILHHTFSFINSMSLKCAIDMSIPDVIHKYGQPMPLSILIASLPIHPSKTNFIYRLMRILTHSGFFSQYMNNLEVSYDLTDASRLLVKDHSFSVTPFVLMVLDPTYLSPWNQFSSWFKSGDPTPFFMEHGVTLYDHIDQDPKHNHMFNDAMASNARLVSSMVIQKCKGVFKGLKSLVDVGGGTGTMAMAIAKLFPQLDCIVFDLPHVVAGLQGSDKNLKYVGGDMFEAIPPADSILLKWILHNWNDEECVKMLKKCKEAITREGKEGKVIIIDMVMMENENVVDDESVETKLFFDLQMMVFFNAKERNEKEWAKLFFSSGFTNYKITPLLGLNSLIEVYQ 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0443 351 Pfam Dimerisation domain 24 72 IPR012967 GO:0046983
Lal9g0443 351 Gene3D Vaccinia Virus protein VP39 98 351 IPR029063 -
Lal9g0443 351 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 14 351 IPR016461 GO:0008168
Lal9g0443 351 PANTHER ORCINOL O-METHYLTRANSFERASE 3 350 - -
Lal9g0443 351 Gene3D - 1 97 IPR036388 -
Lal9g0443 351 PIRSF O-mtase 1 351 IPR016461 GO:0008168
Lal9g0443 351 Pfam O-methyltransferase domain 121 332 IPR001077 GO:0008171
Lal9g0443 351 SUPERFAMILY "Winged helix" DNA-binding domain 4 101 IPR036390 -
Lal9g0443 351 PANTHER O-METHYLTRANSFERASE 3 350 IPR016461 GO:0008168
Lal9g0443 351 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 103 350 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0443 Lal-Chr9 2911950 2915636 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0443 8 351 Monolignol Biosynthesis Gene Families AT5G54160 31.268 3.39e-50 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0443 - - gmx:100781008 494.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0443 9 2911950 2915636 Lal9g0443 9 2911950 2915636 ECH