Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0442 ATGCTGGAAAAGATGGATGATGGAGAAGTTTCAAATTGTTTCCCTCAGAACTTAACAACTACTTCATCTAATAATCCTAATCTTGTTTTGAAGAGAAAAAGAAACCTACCAGGAAACCCAGGCATTTATACAATAGTTAGGATCATTACCCTCAGCTTCTTTGTTTTCTCTTTATATAAATCTCTCTTTACTTTTATTTTTATCACAAATCCTGAAGCTGAAGTCATAACCTTATCACCAAGGACATTAATGGCAACAAACAGGTTCTTGTGTGAAACATGTGGGAAGGGATTCCAAAGGGATCAAAATCTTCAACTTCATCGACGTGGACATAACCTACCTTGGAAGCTGAAGCAAAGAACAAGCAAAGAAATAAGGAAACGAGTATATGTGTGTCCAGAGAAAACTTGTGTCCATCATAACCCTTCTAGGGCTCTGGGAGACTTAACTGGGATAAAAAAGCACTTTTGCAGGAAGCACGGGGAGAAGAAATGGAAGTGTGATAAGTGCTCAAAGTGCTATGCAGTTCAGTCAGATAGGAAAGCACACTCGAAAACCTGTGGTACAAGAGAGTACAAATGTGATTGTGGAACTATCTTTTCAAGGAGGGACAGCTTCATCACTCATAGGGCCTTCTGTGATGCCTTGGCAGAAGAAACAGCTAGGGTAAATGCAACATCAAACATAAGCAACACCTTAGTAGATAACATTAGTTACAACATCATGGGAGCTTCCCTAGGCCCTAACATGGAAACCCAGTTTTCTTCAATTTTCAAGCCAGTTTCAACCACTAATCATGAAACAAGTAATCAAACAAGTACAGGACTATCCCTTTGGATGGGCCAACTATCTCATCAGGCTCATGAAACAATGGTCAATGGAAATATTCATCAACTTGGATCAACCCCAAGATCAGGATCAGCAATATATGGTGGAAACCTATTTAGTCAATGCACAAACAATCCTCCACCCTCTAATAATTATCACCTAAATTGGGTGATTGGGACTAAACCTTCCTCCAATAGTAACCAAGAGCTTATAGCTAGTACTACTACTTCACTTCCACTAGGCAATATTATTAAGGATGCTACATGTACAAGCCATCTTTTAAGTGTTCCTTCCTTATATAGCACGCAACACCAATCCCACCAAACATCCTCAGTAACAAACATGTCTGCCACAGCTTTGTTGCAAAAGGCTGCTCAAATTGGTGCAACCTCAAGTATTGACCCATCATTATTTGGGAACTTAGGTTTGAAATACAGTAACAGCCTAGGTCAAGATGGGAACAAGCTTTGTCTGATGTATGGCTCAAGTTCAGTGCTCACTAGTCTTGGCAGTGAGGCAGAGAAATCTGCATGTGACTTGTCACAAATGCACCCAGCAAAACGTAGACAAGTACAGAATGAGGAAGGTATTGGAGGGGGGCAAACTAGGGATTTTCTTGGTGTTGGGGAAGGAAAAGGTGCGAATGGAGTGCTTGATGGAGGCTGA 1494 0.407 MLEKMDDGEVSNCFPQNLTTTSSNNPNLVLKRKRNLPGNPGIYTIVRIITLSFFVFSLYKSLFTFIFITNPEAEVITLSPRTLMATNRFLCETCGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKRVYVCPEKTCVHHNPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKCYAVQSDRKAHSKTCGTREYKCDCGTIFSRRDSFITHRAFCDALAEETARVNATSNISNTLVDNISYNIMGASLGPNMETQFSSIFKPVSTTNHETSNQTSTGLSLWMGQLSHQAHETMVNGNIHQLGSTPRSGSAIYGGNLFSQCTNNPPPSNNYHLNWVIGTKPSSNSNQELIASTTTSLPLGNIIKDATCTSHLLSVPSLYSTQHQSHQTSSVTNMSATALLQKAAQIGATSSIDPSLFGNLGLKYSNSLGQDGNKLCLMYGSSSVLTSLGSEAEKSACDLSQMHPAKRRQVQNEEGIGGGQTRDFLGVGEGKGANGVLDGG 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0442 497 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 69 486 - -
Lal9g0442 497 PANTHER F-BOX ASSOCIATED PROTEIN 69 486 - -
Lal9g0442 497 ProSitePatterns Zinc finger C2H2 type domain signature. 91 111 IPR013087 -
Lal9g0442 497 MobiDBLite consensus disorder prediction 462 497 - -
Lal9g0442 497 SUPERFAMILY beta-beta-alpha zinc fingers 88 185 IPR036236 -
Lal9g0442 497 ProSiteProfiles Zinc finger C2H2 type domain profile. 89 111 IPR013087 -
Lal9g0442 497 Gene3D Classic Zinc Finger 69 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0442 Lal-Chr9 2906489 2908841 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0442 25 485 IDZ Gene Family AT1G03840 47.471 5.06e-130 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lal9g0442 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0442 K25870 - gmx:100790620 584.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0442 9 2906489 2908841 Lal9g0442 9 2906489 2908841 ECH