Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0441 ATGACTGAGTGCAGTGACCCTGAAAACAATAATAACATGATAATGGAGGGAAGAAAAGATAGCTTGATTAGAACATGTCCTACTTGTGGTCATCATATCAAATGCCAAGACCAGGGCGGTGGAGTTCATGACTTACCTGGACTACCTTCTGGAGTGAAGTTTGATCCAACAGATCAAGAGATTCTTGAACATTTGGAAGCCAAAGTGAGTTCTGATATTCATAAGCTTCATCCACTAATTGATGAGTTCATCCCTACTCTTGAAGGCCAGAATGGAATCTGCTATACTCACCCAGAGAAATTGCCAGGAGTTAGCAAAGATGGCATGATCCGTCATTTCTTTCACAGGCCTTCAAAGGCATATACAACAGGATCAAGGAAAAGGAGAAAGGTGCATTCAGATGAGGATGGTAGTGAAACACGTTGGCACAAAACAGGTAAAACTAGGCCAGTGTATATCAGTGCCAACTTAAAAGGTTACAAGAAAATTCTTGTACTTTACACTAACTATGGAAAGCAAAGAAAGCCAGAGAAAACCAATTGGGTCATGCACCAATACCACCTTGGCAGTGATGAAGAAGAGAAAGAAGGAGAACTAGTAGTCTCCAAAGTTTTCTATCAAACTCAACCTAGACAATGTGGTAATAATTCATTAATGAAAGACTCAGTTCCTGCTAAAATAATGAATAAGGGTCAAATTCTGCATGATAATGAGGTAATTAATAACAACAAAAACAATGGGTTTGTTGATTACTACAATTCAACTTTCATATCATTTGGTCAAGGGGGCCAACATAGATCAATCAATGAGGTGATTTCACATTTTCCTACACATGATGGTGCTCCTTTCATTCCTTGA 858 0.3881 MTECSDPENNNNMIMEGRKDSLIRTCPTCGHHIKCQDQGGGVHDLPGLPSGVKFDPTDQEILEHLEAKVSSDIHKLHPLIDEFIPTLEGQNGICYTHPEKLPGVSKDGMIRHFFHRPSKAYTTGSRKRRKVHSDEDGSETRWHKTGKTRPVYISANLKGYKKILVLYTNYGKQRKPEKTNWVMHQYHLGSDEEEKEGELVVSKVFYQTQPRQCGNNSLMKDSVPAKIMNKGQILHDNEVINNNKNNGFVDYYNSTFISFGQGGQHRSINEVISHFPTHDGAPFIP 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0441 285 Gene3D NAC domain 57 211 IPR036093 GO:0003677|GO:0006355
Lal9g0441 285 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 1 284 IPR044799 GO:0003700
Lal9g0441 285 SUPERFAMILY NAC domain 43 207 IPR036093 GO:0003677|GO:0006355
Lal9g0441 285 Pfam No apical meristem (NAM) protein 49 188 IPR003441 GO:0003677|GO:0006355
Lal9g0441 285 MobiDBLite consensus disorder prediction 127 142 - -
Lal9g0441 285 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 284 - -
Lal9g0441 285 MobiDBLite consensus disorder prediction 121 142 - -
Lal9g0441 285 ProSiteProfiles NAC domain profile. 48 207 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0441 Lal-Chr9 2898789 2901627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0441 24 216 NAC Transcription Factor Family AT4G28500 78.866 2.96e-114 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal9g0441 NAM 5.3e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0441 - - gmx:100797459 506.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0441 9 2898789 2901627 Lal9g0441 9 2898789 2901627 ECH