Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0436 ATGTCTAGCAGAGAAATTCTCCATAAGATGAAGTTTAACATAGTTCCAGGGCCTAGCTTCAAAAGATGTGCCAAAGCAGGGTTTGGAACATCAGGTCCAGGCACAGGAAAAGGAAAAAGCAAAATGTCAAAACATATTACACATGGCTTCCACTTGGTGAAGGGAAAAGCAGGCCATCCTATGGAAGATTATTTAGTTTCAAAATTTAAGCAAGAAAAGGACAAAGAATTAGGCTTATTTGCTATATTTGATGGTCATTTAGGCCATGATGTTGCAAGCTATTTGCAGGATCACCTTTTTGAAAATATCTTGACACAGCATGATTTCTGGACTGAAACAGAAAGTGCAGTAAAGAGAGCTTATATTGAAACAGATGATAAAATTCTGGAACAAGCACTTATCTTAGGAAGAGGAGGATCAACAGCAGTAACTGCAATACTAATTGATGGTCAGAAACTTGTAGTAGCAAATGTTGGTGATTCTAGAGCTGTTATTTGTGACAATGGAAAAGCCAAGCAATTATCAATTGATCATGAACCTAGCAAGGAAAAAAAATCTATTGAGAAACGTGGTGGTTTTGTATCAAATATTCCAGGAGATGTCCCTCGTGTAGATGGACAGTTAGCAGTAGCAAGAGCTTTTGGTGACAAGAGCTTGAAGATGCATCTTAGTTCAGAACCTGATGTGTTTGAAGTGGAGATAGACCAACATGCAGAATTCATTATTCTAGCTAGTGATGGGATATGGAAGGTTATGTCAAATCAAGAAGCAGTGGACTCTATTAGAGAAATTAAAGATGCTCAAGTATCAGCAAAGCACTTGATAGAAGAGGCTATTTCCAAGAAAAGTAAGGATGACATATCCTGCATAGTTGTGAAGTTCCAATAA 888 0.3761 MSSREILHKMKFNIVPGPSFKRCAKAGFGTSGPGTGKGKSKMSKHITHGFHLVKGKAGHPMEDYLVSKFKQEKDKELGLFAIFDGHLGHDVASYLQDHLFENILTQHDFWTETESAVKRAYIETDDKILEQALILGRGGSTAVTAILIDGQKLVVANVGDSRAVICDNGKAKQLSIDHEPSKEKKSIEKRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKMHLSSEPDVFEVEIDQHAEFIILASDGIWKVMSNQEAVDSIREIKDAQVSAKHLIEEAISKKSKDDISCIVVKFQ 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0436 295 Pfam Protein phosphatase 2C 58 287 IPR001932 -
Lal9g0436 295 PANTHER PROTEIN PHOSPHATASE 2C 1 295 IPR015655 GO:0004722|GO:0006470
Lal9g0436 295 Gene3D - 34 295 IPR036457 -
Lal9g0436 295 SUPERFAMILY PP2C-like 43 294 IPR036457 -
Lal9g0436 295 SMART PP2C_4 42 292 IPR001932 -
Lal9g0436 295 CDD PP2Cc 48 294 IPR001932 -
Lal9g0436 295 PANTHER PROTEIN PHOSPHATASE 2C 39-RELATED 1 295 - -
Lal9g0436 295 SMART PP2C_SIG_2 62 294 IPR001932 -
Lal9g0436 295 ProSiteProfiles PPM-type phosphatase domain profile. 47 294 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0436 Lal-Chr9 2869877 2872598 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0436 36 295 PP2C-type Phosphatase Gene Family AT4G28400 75.769 1.00e-144 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0436 K17506 - gmx:100819846 469.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0436 9 2869877 2872598 Lal9g0436 9 2869877 2872598 ECH