Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0435 ATGGCCACTAACCATCAACACGACCCTCTCTTACCCTTTCTACGGTCTATCAAGAAAGCTCTAGAAGGTTCTAGTGATTCTGATTCCGATCTCAGTAAATTACTTATATATTGTATCACAAGTTTCAAACACAGCGACCAGTATCGAAACGATGTTAGATTTCTTAAGATTTGGCTCCTCTATATGGGTGTTAGTGCAGATTTTGATACTGTTTTCAAAGAAATGCTGGATAGTAAAATATGCGTCAATAATTCTTCACTTTATGTGTGGTCTGCTTCTTTTTTTGAATTAAAGGGAAGATTGCGTGATGCCTTCACAATCTATCAGCTTGGCATTTCCAGGAATGCGGAGCCAATTGAGTGGTTGAAGAAAGCACAGACCTTATTTCTCAGTAGAATTTCTGGAATACAGAATGCTGCTTCAAGTCAGAAGATTGATGATAAAGAACACATGAAATTGGTGAACAAGGACATTAATCCATGGGACACCTCCACAATGAATGATCTATTGAAGAAGATAGATCCTTTAATTGCAAAAGCTGATGGGTATTATTCAAGTACTAAACCTTACACAGGAAAAGTAGCCTTATCTACTCTGAAGAATTCATCAAGGAATAAAGTTATAGAGATAGGTGGAAACAAGTACCATATCAAGGGTTGTGCTGGACAGGGTGGTTTTGCTCAAGTATATAAAGCATATGTCAATGGTGATCCTGATGATCTTGTTGCATTAAAGATACAAAAGCCGCCTTTCCCTTGGGAGTTTTACATGTATCGTCAGCTTGATATGCGAATTATAGGCAGAGAAAGGTTAAGCTATGGTTTGGCTCATAGAGTTCATCTATACTCTGATTGTAGCATACTCATATGTGATTATTTAGCTCATGGAACGCTTCAGGACGCCATAAACTCATATGCGGTCATAGGAAAATCCATGGAAGAAGTGTTATGTATTTATTACACTACAGAAATGTTACAAATGGTTGAAACTATGCATGATGCTGGCTTGATTCATAGTGATTTCAAGCCTGATAATCTGCTTATTCGCTATGCTAGGGGTGATCTCACAGAAGATGGTTTCTTGGACCGAAGTGGTTCTTGGCGTGATCAGGGTCTTTGCCTTGTTGACTGGGGACGAGGGATTGATCTGCATCTCTTTCCAGATAACACAACGTTTAAAGGAGATTGCAGAACTTCTGGTTTTCGCTGCATTGAGATGCAAGAGGATAAGCCATGGAAATTTCAGGCAAACACATATGGCCTTTGTGTTGTTGTCCATATGATGTTGCACAATTGCTATATGGAGGTTGTCAAAAAAGAATCATCTGATGGGGTCTCCGTGTATCTTCCCAGGCTACCCTTTAAACGTTACTGGAACATTGACCTGTGGAAGAATTTCTTCACCAAGATGCTAAATCAATACCCTGGCAATGATGATAGAAGATTGCTGCAAGAGTTGAAGAAGTCTTTCCAAGACTATATGAACTCTAATCCCCAGCTTGTGAAGAAACTAAAGGAGTTACTAGCCAAGCAAAGGGCTTCCTTGTCACAAAACTTGACTACAATCATGGCTGATGGACCGCAGCATCCATCGGTGGTTCAGAAGTTAGCTGGACACTCTTATCTTGTGTCCAGGCTTAGCCCCAACTTTAATTCCAGGAATTATTCGAATTATGGTGCTTGCTTCAATGGAGGTGTGCAGCCTTCTGGTTTGGCAATTGTCTCACCCGTTTGTTCCATTACCGTGCCTGCTCCAGCAGAGAAAGGTGCAGCTGGATTTTTGGTGGATTTTCTGATGGGAGGAGTGTCTGCTGCTGTATCTAAGACAGCCGCTGCTCCAATTGAACGTGTTAAATTACTTATCCAAAACCAAGATGAAATGATCAAAAGTGGTCGGCTATCTGAGCCATATAAGGGAATTTCTGATTGCTTTGCTCGAACCATGAAGGATGAGGGTGTGATTGCTCTTTGGAGAGGAAATACTGCTAATGTTATCAGATACTTTCCTACTCAGGCTTTGAATTTTGCATTTAAGGATTACTTCAAGAGGCTTTTCAACTTTAAAAAAGACAGAGATGGCTACTGGAAGTGGTTTGCTGGGAATTTGGCTTCTGGTGGGGCTGCTGGGGCTTCCTCCCTCCTATTTGTCTATTCCTTGGATTATGCTCGAACACGTTTGGCTAATGATGCAAAAGCTGCAAAGAAGGGTGGAGGGAGGCAATTTAATGGTTTGGTTGATGTTTACAGGAAAACCATAAAGTCTGATGGTGTTGCTGGCCTTTATCGTGGGTTCAACATTTCATGTGTTGGAATTATTGTGTATCGTGGTCTATACTTTGGAATGTATGATTCTCTGAAACCAGTTGTTTTGGTTGGTGGAATGCAGGATAGTTTCTTTGCTAGTTTCCTTTTGGGATGGGGAATCACAATTGGTGCTGGCTTGGCTTCTTATCCCATTGACACTGTGCGTAGAAGGATGATGATGACTTCTGGAGAAGCTGTGAAGTACAAGAGCTCTTTGCATGCATTCCAAACAATCCTTGCAAATGAAGGTGCCAAGTCACTCTTCAAAGGTGCTGGTGCAAACATATTGCGTGCTGTAGCAGGTGCTGGTGTGCTTGCTGGTTATGACAAGCTGCAGCTCATCATGTTTGGAAAGAAATACGGTTCTGGCGGTGGCTAA 2682 0.4142 MATNHQHDPLLPFLRSIKKALEGSSDSDSDLSKLLIYCITSFKHSDQYRNDVRFLKIWLLYMGVSADFDTVFKEMLDSKICVNNSSLYVWSASFFELKGRLRDAFTIYQLGISRNAEPIEWLKKAQTLFLSRISGIQNAASSQKIDDKEHMKLVNKDINPWDTSTMNDLLKKIDPLIAKADGYYSSTKPYTGKVALSTLKNSSRNKVIEIGGNKYHIKGCAGQGGFAQVYKAYVNGDPDDLVALKIQKPPFPWEFYMYRQLDMRIIGRERLSYGLAHRVHLYSDCSILICDYLAHGTLQDAINSYAVIGKSMEEVLCIYYTTEMLQMVETMHDAGLIHSDFKPDNLLIRYARGDLTEDGFLDRSGSWRDQGLCLVDWGRGIDLHLFPDNTTFKGDCRTSGFRCIEMQEDKPWKFQANTYGLCVVVHMMLHNCYMEVVKKESSDGVSVYLPRLPFKRYWNIDLWKNFFTKMLNQYPGNDDRRLLQELKKSFQDYMNSNPQLVKKLKELLAKQRASLSQNLTTIMADGPQHPSVVQKLAGHSYLVSRLSPNFNSRNYSNYGACFNGGVQPSGLAIVSPVCSITVPAPAEKGAAGFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGISDCFARTMKDEGVIALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGGRQFNGLVDVYRKTIKSDGVAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLVGGMQDSFFASFLLGWGITIGAGLASYPIDTVRRRMMMTSGEAVKYKSSLHAFQTILANEGAKSLFKGAGANILRAVAGAGVLAGYDKLQLIMFGKKYGSGGG 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0435 893 SUPERFAMILY Protein kinase-like (PK-like) 212 497 IPR011009 -
Lal9g0435 893 ProSiteProfiles BUB1 N-terminal domain profile. 1 150 IPR013212 -
Lal9g0435 893 Pfam Mitochondrial carrier protein 796 883 IPR018108 -
Lal9g0435 893 Pfam Mitochondrial carrier protein 695 788 IPR018108 -
Lal9g0435 893 Pfam Mitochondrial carrier protein 592 688 IPR018108 -
Lal9g0435 893 Pfam Mad3/BUB1 homology region 1 4 112 IPR013212 -
Lal9g0435 893 Pfam Protein kinase domain 216 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g0435 893 PRINTS Mitochondrial carrier protein signature 596 609 IPR002067 GO:0055085
Lal9g0435 893 PRINTS Mitochondrial carrier protein signature 609 623 IPR002067 GO:0055085
Lal9g0435 893 PRINTS Mitochondrial carrier protein signature 659 679 IPR002067 GO:0055085
Lal9g0435 893 PRINTS Mitochondrial carrier protein signature 711 729 IPR002067 GO:0055085
Lal9g0435 893 PRINTS Mitochondrial carrier protein signature 761 779 IPR002067 GO:0055085
Lal9g0435 893 PRINTS Mitochondrial carrier protein signature 805 827 IPR002067 GO:0055085
Lal9g0435 893 ProSiteProfiles Solute carrier (Solcar) repeat profile. 591 684 IPR018108 -
Lal9g0435 893 SMART serkin_6 215 524 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g0435 893 SMART mad3_bub1_i 1 112 IPR013212 -
Lal9g0435 893 Gene3D Mitochondrial carrier domain 594 889 IPR023395 -
Lal9g0435 893 ProSiteProfiles Protein kinase domain profile. 215 532 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g0435 893 ProSiteProfiles Solute carrier (Solcar) repeat profile. 696 788 IPR018108 -
Lal9g0435 893 Gene3D - 1 151 - -
Lal9g0435 893 SUPERFAMILY Mitochondrial carrier 592 878 IPR023395 -
Lal9g0435 893 ProSitePatterns Serine/Threonine protein kinases active-site signature. 336 348 IPR008271 GO:0004672|GO:0006468
Lal9g0435 893 PANTHER ADP,ATP CARRIER PROTEIN 1, MITOCHONDRIAL-RELATED 528 893 - -
Lal9g0435 893 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 528 893 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lal9g0435 893 ProSiteProfiles Solute carrier (Solcar) repeat profile. 796 882 IPR018108 -
Lal9g0435 893 PRINTS Adenine nucleotide translocator signature 593 605 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lal9g0435 893 PRINTS Adenine nucleotide translocator signature 637 658 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lal9g0435 893 PRINTS Adenine nucleotide translocator signature 670 682 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lal9g0435 893 PRINTS Adenine nucleotide translocator signature 696 709 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lal9g0435 893 PRINTS Adenine nucleotide translocator signature 801 817 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lal9g0435 893 Gene3D Transferase(Phosphotransferase) domain 1 213 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0435 Lal-Chr9 2857318 2867272 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0435 525 884 Antiporters AT4G28390 81.301 0.0 576
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK BUB Lal9g0435 Pkinase 1.4e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0435 K02178 - gmx:100802272 867.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0435 9 2857318 2867272 Lal9g0435 9 2857318 2867272 ECH