Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0393 ATGGTTGAAGGGAAACAATTCAAGACGAGGTTATGTGTGCTCTACCAGAGAGGTCGCTGTAACCGAAATAACTGCTCCTTTGCGCATGGGAGCGTTGAGCTGCGACGATTCTCTGCCTCATATAGTGAACTAGCAGATTATCACCGAGGAAACCACAGGGTGAGCCTCAGCGCACGGTTAGGTTGCTTCTTAGGGCCTGTTTGCGAGTTTAGTTTTGAAGGGGAAGGGAGGAAAAAGGAAGGGAGGAGAGAGTATTCAGGTAATGACTTGAGGGATAAACTTGACAGAAGGTATTTATCACCTCCTCGAAGGTACTCACCAGCTAGAAATGGAAGAGGCCGCCAGGCCATTCATGGATACAGTCCCTCAAGGTCCTCAGAGAAACAAAGTGATAGAAGGCATATAAGGAAGCAAGGAACTACCGGCCAACGTGATAATCCTGGGAGTTTAAAATTCTTGGGTAGAATTCAAGATCAAGTTAAAGAAGGAAAACTGTTTTCCTCTGGCTCTAGAAATACACTTGATGAGCAGCTGAAGAAAGTAGAGTCAGATATCAACACTCTTGAGAACCGAAAGTTCCAACTAGAGGTCTACCTGGATGAGAGTGTTCAAGAAGCGGATAGCCTTAATTCTACAATTCAGGAACTTGATGCTCAATTATTCAAAGAGAAGGAGGAGTGTAGAAGATCACAGGTCCGACTTCAAAGGTTCGGAGATGAACTTGTCTCTGACATTTCTAGAATTGGTGCCAGTGAAGAAGATTTAAGCATTGATATTGTAAGCAATGGTGAGAATTCGGCTCTTCCTCCGGCCATCAAACATAATGTGGATCAGAATGATGCATCTCCCCACTGGAAAAGGCTGCATGTTAAACAAGATGCTGTGGAAGAGTTGAAACAAGGTAGAAGTTATGAAAAGTACTATAGATCAAAAGTTGGGAATTTGGTTGGAACATCGAGAACCAGGAAGCGGTCTCGGTGGAATTTGCCTGCTCAGTTAAATGACAAGGATGAAGAAAACATTGATGTCCCCTCAAACACTGGAACTGATGTTACTAGGACCGTCAATCATGAAGGGAAGCACAAGGGAGGAATATGTAATTCTTCTAACAACCTAATTTCAGAAAAGTTTAAGGAATCTAGGATTGAAGTGCCACCAACTAGCATGGCAGCTCATGTGATTGATGAGGAAATTGAGATTGAACTTAATGACAGAACTGATATCACTGAAACTGTAAAAAACAAAAATGAGAATGGAGTGGCACATGAGGCAAAGAGCCTACTGCTTATGCTTCGCCCAGGTTTGATTCCTCGTAGTAATTATTCGCAGTATGAAGGTGATGAAGAGAATGTGGATGTGGATGTGGATGTGCTTGAAGAAGAGGATGCAGGGACACATGTGGACTTCTCTTCCATAGAGTAG 1422 0.4318 MVEGKQFKTRLCVLYQRGRCNRNNCSFAHGSVELRRFSASYSELADYHRGNHRVSLSARLGCFLGPVCEFSFEGEGRKKEGRREYSGNDLRDKLDRRYLSPPRRYSPARNGRGRQAIHGYSPSRSSEKQSDRRHIRKQGTTGQRDNPGSLKFLGRIQDQVKEGKLFSSGSRNTLDEQLKKVESDINTLENRKFQLEVYLDESVQEADSLNSTIQELDAQLFKEKEECRRSQVRLQRFGDELVSDISRIGASEEDLSIDIVSNGENSALPPAIKHNVDQNDASPHWKRLHVKQDAVEELKQGRSYEKYYRSKVGNLVGTSRTRKRSRWNLPAQLNDKDEENIDVPSNTGTDVTRTVNHEGKHKGGICNSSNNLISEKFKESRIEVPPTSMAAHVIDEEIEIELNDRTDITETVKNKNENGVAHEAKSLLLMLRPGLIPRSNYSQYEGDEENVDVDVDVLEEEDAGTHVDFSSIE 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0393 473 MobiDBLite consensus disorder prediction 79 102 - -
Lal9g0393 473 MobiDBLite consensus disorder prediction 79 150 - -
Lal9g0393 473 ProSiteProfiles Zinc finger C3H1-type profile. 6 32 IPR000571 GO:0046872
Lal9g0393 473 SMART c3hfinal6 6 31 IPR000571 GO:0046872
Lal9g0393 473 Coils Coil 199 226 - -
Lal9g0393 473 Gene3D - 1 36 - -
Lal9g0393 473 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 40 1 455 IPR045868 GO:0046872
Lal9g0393 473 Coils Coil 171 191 - -
Lal9g0393 473 MobiDBLite consensus disorder prediction 125 140 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Lal9g0393 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0393 - - aprc:113858008 503.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0393 9 2607133 2615766 Lal9g0393 9 2607133 2615766 ECH