LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal9g0392	ATGTCTGAATTCGACACAAACATCCCAACCGCTTTTGATCCCTTTGCTGAGGCAAATGCTGAGGACTCCGGTGCTGGGACGAAAGAGTATGTTCATGTGCGTGTACAACAACGTAACGGAAGGAAAAGCTTAACAACTGTTCAAGGATTAAAGAAAGAGTACAGCTATACCAAGATACTCAAGGACCTGAAGAAAGAATTCTGCTGTAATGGTACTGTTGTCCAGGACCCTGAGTTGGGCCAGGTCATACAACTTCAAGGAGATCAAAGAAAGAATGTTTCTACTTTCCTTGTGCAGGCTGGCATAGTAAAGAAGGACAATATCAAGATTCACGGTTTCTAA	342	0.4298	MSEFDTNIPTAFDPFAEANAEDSGAGTKEYVHVRVQQRNGRKSLTTVQGLKKEYSYTKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKDNIKIHGF	113

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal9g0392	113	ProSiteProfiles	Translation initiation factor SUI1 family profile.	31	101	IPR001950	GO:0003743\|GO:0006413
	Lal9g0392	113	Pfam	Translation initiation factor SUI1	28	102	IPR001950	GO:0003743\|GO:0006413
	Lal9g0392	113	PANTHER	EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1	1	113	-	-
	Lal9g0392	113	PANTHER	EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1	1	113	-	-
	Lal9g0392	113	CDD	eIF1_SUI1	29	112	IPR005874	GO:0003743
	Lal9g0392	113	PIRSF	Transl_init_SUI1_Euk	1	113	IPR005874	GO:0003743
	Lal9g0392	113	Gene3D	-	2	113	-	-
	Lal9g0392	113	TIGRFAM	SUI1_MOF2: translation initiation factor SUI1	7	113	IPR005874	GO:0003743
	Lal9g0392	113	SUPERFAMILY	eIF1-like	7	113	IPR036877	GO:0003743\|GO:0006413

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lal9g0392	Lal-Chr9	2600920	2603518	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lal9g0392	1	113	Eukaryotic Initiation Factors Gene Family	AT4G27130	92.920	7.10e-78	223

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lal9g0392	K03113		-	gmx:100784390	224.172

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lal9g0392	9	2600920	2603518	Lal9g0392	9	2600920	2603518	ECH
	Lal2g0421	2	2522216	2524195	Lal9g0392	9	2600920	2603518	LSH