Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0363 ATGTTTAACGGTATGATGGATCCTGAGATGTTCAGAATCGCTCAGGAACAGATGAGTCGCATGTCACCCGCTGAGTTGGCTCGGATCCAACAACAGATGATGTCTAATCCAGAGTTGATGAGGATGGCCTCAGAAAGCATGAAGAACATGAGTTCAGAAGACTTTAAACTTGCTGCTGAGCAGTTAAAGCGGACACGTCCTGAAGATATGGCTCAGATTGGTGAGAAAATGGCTAATGCAACACCTGATGAAGTAGCAGCTATGCGTTCCCGTGCTGATGCCGAGATCAAATACCAGTTAAATGCAGCTGAGATGTTGAAGAAGCAGGGAAATGAACTTCATAATCAGGGAAAGTTCAATGATGCCTTGCAGAAATATCTGCTTGCTAAGGAAAACATCAAAGAAATTCCACCGTTTCAAAGCAGAAAGCTTCTTTTGGCCTGCTCACTCAACTTGATGTCCTGTTACTTGAAGATAAGGCAGTATGAAGAATGCGTAAAAGAAGGGTCTGAGGTTTTGGCATATGATGCCAAGAATCTTAAGGCTCTTTATCGAAGAGGTCAGGCATACAAGCAACTAGGCCTACTAAATGATGCTGTTACCGATTTGAGCATGGCACTTGAAGTGACCCCTGATGATGATACAATTTCAGAGCTTTTACGGGACACCAAGGAAATGTTGACAAAGGGAGGTGGTGAACATGCACCCAGAGGATTAGTAATTGAAGAAATAACTGAAGAAGTCGAGAGTAAGCCTTCTGAAAGCAACAAAAGCTCATCTTTGAAACCAACAGTGGTTCAACGAAAACAATCTGGTGACTCTTCTAAGATTAGCAGTACAGTTAACAATGGAAATCCAAAAGCATATGCAGAGAGTTTAGATACATTGAAAAATGATCCAGAAGCTATCAGATCATTCCAAAACTTCATTTCAAATGCTGATCCTGCCACTCTGGCTTCTCTTAATACTGGACAATCCAAAGATCTACCTCCAGATATGATTAGAACTGCTTCAAATATGATTGGAAAGATGTCACCTGAGGAACTCCAAAAAATGCTTGACATGGCTGCTTCATTTCAAGGCGGCAACCCATTTGGCAGAGGTTCCCCTGATTCTTCATTCAACACTGGATCAATCCCCTCCAATGTGACACCTGATATGTTTAAAACAGCAAGTGATATGATAAGTAAAATGCCACCAAATGAGCTTCAGAAGATGTTTGAAATGGCATCCTCATTGAAAGGGAAAGAATCTATCCCATCATCATCTGCCGTAGATAAGGATGAAAGAAATGATTCCTGGTCAAACTTCCCATCCTCAAGTACTAATGGAACTAATGCTTCCGTAGAATCAAGTCCTTTGCACGATGCATTTTCAAATATGAGAAATGCTTCTCAGCCAAACTTCCCTTCCTCGAGCACTGATTTACAAGAACAGATGAGAAACCAGATGAAAGATCCAGCTATGCGGCAGATGTTCACATCAATGATTAAAAATATGAGCCCAGATATGATGGCAAACATGAGTGAACAGTTTGGTTTCAAGCTTTCAAAAGAAGATGCAGCAAAAGCTCAGCAAGCTATGTCATCGTTTTCACCTGAGAGCTTGGATAAAATGATGCGTTGGGCAGACAGGATTCAAAGAGGAGTTGAAGGTGTAAAGAAGACAAAGAACTGGCTGCTAGGGAAACCTGGTATGGCCTTGGCAATGTTCATGCTCATTTTGGCTGTCCTTCTACACCGGTTGGGTTACATCGGCGGCTAG 1764 0.4201 MFNGMMDPEMFRIAQEQMSRMSPAELARIQQQMMSNPELMRMASESMKNMSSEDFKLAAEQLKRTRPEDMAQIGEKMANATPDEVAAMRSRADAEIKYQLNAAEMLKKQGNELHNQGKFNDALQKYLLAKENIKEIPPFQSRKLLLACSLNLMSCYLKIRQYEECVKEGSEVLAYDAKNLKALYRRGQAYKQLGLLNDAVTDLSMALEVTPDDDTISELLRDTKEMLTKGGGEHAPRGLVIEEITEEVESKPSESNKSSSLKPTVVQRKQSGDSSKISSTVNNGNPKAYAESLDTLKNDPEAIRSFQNFISNADPATLASLNTGQSKDLPPDMIRTASNMIGKMSPEELQKMLDMAASFQGGNPFGRGSPDSSFNTGSIPSNVTPDMFKTASDMISKMPPNELQKMFEMASSLKGKESIPSSSAVDKDERNDSWSNFPSSSTNGTNASVESSPLHDAFSNMRNASQPNFPSSSTDLQEQMRNQMKDPAMRQMFTSMIKNMSPDMMANMSEQFGFKLSKEDAAKAQQAMSSFSPESLDKMMRWADRIQRGVEGVKKTKNWLLGKPGMALAMFMLILAVLLHRLGYIGG 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0363 587 SUPERFAMILY TPR-like 96 225 IPR011990 GO:0005515
Lal9g0363 587 MobiDBLite consensus disorder prediction 411 479 - -
Lal9g0363 587 Gene3D Tetratricopeptide repeat domain 89 231 IPR011990 GO:0005515
Lal9g0363 587 MobiDBLite consensus disorder prediction 247 290 - -
Lal9g0363 587 PANTHER OUTER ENVELOPE PROTEIN 61 58 586 - -
Lal9g0363 587 MobiDBLite consensus disorder prediction 254 289 - -
Lal9g0363 587 MobiDBLite consensus disorder prediction 434 479 - -
Lal9g0363 587 SMART tpr_5 103 136 IPR019734 GO:0005515
Lal9g0363 587 SMART tpr_5 146 179 IPR019734 GO:0005515
Lal9g0363 587 SMART tpr_5 180 213 IPR019734 GO:0005515
Lal9g0363 587 ProSiteProfiles TPR repeat profile. 180 213 IPR019734 GO:0005515
Lal9g0363 587 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 58 586 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0363 Lal-Chr9 2416684 2422667 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0363 99 227 Calmodulin-binding Proteins AT5G48570 33.333 3.96e-15 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0363 - - gmx:100800315 908.672
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0504 1 3235483 3241538 Lal9g0363 9 2416684 2422667 LSH