Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0352 ATGGATGTTGATTCCTCTATGGCGTCGGAGTCCGATCATGATCCGGCGGTGCTGAACCATGCTGTTTCAGCGGATAGGGAGAGCCAAGGGGAGTTTCCGTCAGGTGGAGGATCTCCGTCGACGCCGCAGATTCAACAGCAGCCGCCGGTGCAGCAGCAGCAGACGGGGGCCAGTGGTCAGGTGCAGCAGAGTCCGGTTGCTGGTCCTAGGCTTGCGCCAACTTACTCGGTGGTGGATGCGATTATGGAGAAGAAGGAGGACGGGCCGGGGCCGCGATGCGGTCACACGTTGACGGCAGTGGCGGCTGTCGGAGAAGAAGGCACGCCGGGGTACATTGGTCCTAGGTTGATTTTGTTTGGTGGTGCCACTGCACTTGAAGGGAATTCTGGTGCTTCAGGGACTCCTTCATCTGCTGGAAATGCTGGCATTCGTTTAGCTGGTGCCACAGCTGACGTCCACTGTTATGATGTCTTGAGTAATAAATGGTCTAGGATAACTCCCTTTGGAGAGCCCCCAACCCCAAGAGCTGCACATGTGGCAACTGCTGTGGGAACGATGGTAGTTATTCAGGGTGGTATTGGTCCTGCTGGTTTGTCAGCAGAGGACCTTCATGTTCTTGATCTTACTCAGCAACGGCCACGATGGCATAGAGTTGGTGTTCCAGGCCCTGGGCCAGGGCCACGCTATGGACATGTAATGGCTTTGGTAGGGCAGAGATATCTCATGGCAATTGGAGGAAATGATGGAAAGAGACCTTTGGCTGATGTATGGGCCTTGGACACAGCTGCCAAGCCCTATGAATGGCGCAAGTTGGAGCCAGAAGGAGAGGGTCCACCTCCATGCATGTATGCAACTGCTAGTGCCCGCTCTGATGGGCTTCTTCTGCTTTGTGGAGGGAGGGATGCCAATAGTGTTCCATTGGCAAGTGCGTATGGTCTTGCTAAGCATAGAGATGGTCGTTGGGAATGGGCAATTGCCCCTGGTGTCTCTCCATCTTCAAGATATCAGCATGCAGCGGTATTTGTTAATGCAAGACTCCATGTGTCTGGTGGGGCTCTTGGTGGAGGACGGATGGTAGAAGACTCATCAAGTATTGCAGTGTTGGACACTGCTGCTGGTGTTTGGTGTGATACAAAATCTGTTGTTACCAGTCCAAGAACAGGTAGATACAGTGCTGATGCAGCTGGTGGAGATGCCGCAGTGGAGTTGACACGGCGCTGTAGGCATGCTGCTGCTGCTGTTGGTGACTTAATTTTTATTTATGGTGGTTTACGTGGTGGAGTCTTGCTGGATGACCTACTTGTTGCTGAAGATCTTGCTGCTGCTGAAACAACTGCCGCTGCTTCACATGCTGCTGCTGCAGCAGCTGCGTCTAACGTACAAGTGGGACGGCTATCTGGACAATATGGGTTTATTGATGATAGGACAAAGCAAACAATGCCTGAAGCAACTGATGATGGTGCAGTTGTTTTGGGCAACCCAGTTGCTCCCCCTGTAAATGGTGATATGTATACTGATATCAGCACTGAAAATGCCATGCTTCAGGGATCTAGAACTTTGAACAGGCGAACTAGCAAAGGTGTTGAGTATCTGGTTGAAGCATCAGCTGCTGAAGCTGAAGCTATCAGTGCCACGCTGGCTGCTGCCAAGGCGCGGCAGGAGAATGGAGAAGTTGAGTTGCCTGACAGAGACCGTGGGGCTGAGGCTACCCCTAGTGGGAAACAAACCTCTTCCTTGATTAAGCCTGATTCTGCAGGGCCAAATAATATCACTCCTGGTGGAGTTAGGCTACATCACAGAGCTGTGGTTGTTGCTGCAGAGCCTGGTGGAGCACTAGGTGGCATGGTTAGACAGCTTTCGATTGATCAGTTTGAAAATGAAGGCAGACGGGTCAGTTATGGGACTCCAGAAAATGCCACTGCTGCTCGAAAGTTACTAGATCGACAGATGTCTATCAATAGTGTCCCAAAGAAGATAATAACACACCTCTTAAAGCCTCGTGGCTGGAAACCACCAGTTCGCAGGCAGTTTTTCTTAGATTGCAATGAAATTGCAGATCTTTGTGATACTGCAGAGCGGATATTTTCAAACGAACCAAGCGTCATACGACTTCGGGCACCAATTAAAATATTTGGTGATTTACATGGGCAGTTTGGGGATCTCATGCGCCTGTTTGATGAGTATGGTGCACCATCGACTGCTGGTGACATAGCATATATCGATTATCTATTCCTAGGAGATTATGTTGATAGGGGCCAACACAGTCTGGAAACCATAAGCCTTCTGCTTGCCCTGAAGATTGAATATCCAAACAATGTACATTTAATACGTGGGAACCATGAAGCTGCTGATATTAATGCCCTTTTTGGTTTCCGAATTGAGTGCATTGAGAGGATGGGGGAGAGAGATGGAATTTGGGCATGGCACCGGATAAACCGTGTATTTAATTGGCTTCCTTTGGCAGCTCTGATTGAGAAAAAGATTATTTGCATGCATGGGGGTATTGGTCGTTCTATAAATCATGTGGAACAGATTGAAAATATTCAACGTCCAATTACAATGGAAGCAGGATCCATTGTGCTCATGGATCTATTGTGGTCTGATCCTACTGAGAATGACAGCGTGGAAGGATTGCGGCCAAATGCTAGAGGTCCAGGTTTAGTTACTTTTGGGCCTGATCGTGTCATGGAATTTTGCAACAACAACGATCTTCAGCTGATTGTTCGTGCACATGAATGTGTAATGGATGGCTTTGAGCGTTTTGCCCAGGGACATTTGATCACGCTTTTCTCAGCTACAAACTACTGTGGTACTGCAAATAATGCTGGGGCGATATTAGTTTTGGGTAGAGATCTTGTTGTTGTTCCTAAACTGATTCATCCATTACCACCTGCAATTTCTTCACCCGAAACGTCACCTGAACGTCATATTGAAGATACATGGATGCAGGAGTTGAATGCTAACAGACCGCCGACACCCACTAGAGGCCGTCCTCAAGTAACAAATGAACGAGGCTCGCTTGCCTGGATATAG 3033 0.4896 MDVDSSMASESDHDPAVLNHAVSADRESQGEFPSGGGSPSTPQIQQQPPVQQQQTGASGQVQQSPVAGPRLAPTYSVVDAIMEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSGASGTPSSAGNAGIRLAGATADVHCYDVLSNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVGVPGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSSRYQHAAVFVNARLHVSGGALGGGRMVEDSSSIAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTAAASHAAAAAAASNVQVGRLSGQYGFIDDRTKQTMPEATDDGAVVLGNPVAPPVNGDMYTDISTENAMLQGSRTLNRRTSKGVEYLVEASAAEAEAISATLAAAKARQENGEVELPDRDRGAEATPSGKQTSSLIKPDSAGPNNITPGGVRLHHRAVVVAAEPGGALGGMVRQLSIDQFENEGRRVSYGTPENATAARKLLDRQMSINSVPKKIITHLLKPRGWKPPVRRQFFLDCNEIADLCDTAERIFSNEPSVIRLRAPIKIFGDLHGQFGDLMRLFDEYGAPSTAGDIAYIDYLFLGDYVDRGQHSLETISLLLALKIEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRVFNWLPLAALIEKKIICMHGGIGRSINHVEQIENIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAISSPETSPERHIEDTWMQELNANRPPTPTRGRPQVTNERGSLAWI 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0352 1010 MobiDBLite consensus disorder prediction 986 1010 - -
Lal9g0352 1010 Pfam Kelch motif 334 379 IPR011498 GO:0005515
Lal9g0352 1010 MobiDBLite consensus disorder prediction 33 69 - -
Lal9g0352 1010 MobiDBLite consensus disorder prediction 570 585 - -
Lal9g0352 1010 Gene3D - 196 311 IPR015915 GO:0005515
Lal9g0352 1010 Gene3D - 74 195 IPR015915 GO:0005515
Lal9g0352 1010 MobiDBLite consensus disorder prediction 1 70 - -
Lal9g0352 1010 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 1010 - -
Lal9g0352 1010 Pfam Calcineurin-like phosphoesterase 707 914 IPR004843 GO:0016787
Lal9g0352 1010 CDD MPP_Bsu1_C 659 961 IPR041758 -
Lal9g0352 1010 Gene3D - 643 983 IPR029052 -
Lal9g0352 1010 ProSitePatterns Serine/threonine specific protein phosphatases signature. 776 781 IPR006186 GO:0016787
Lal9g0352 1010 SMART pp2a_7 679 963 IPR006186 GO:0016787
Lal9g0352 1010 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 1 1010 - -
Lal9g0352 1010 SUPERFAMILY Kelch motif 147 436 IPR015915 GO:0005515
Lal9g0352 1010 PIRSF STPPP_BSU1 40 1010 IPR012391 GO:0004721|GO:0009742
Lal9g0352 1010 Pfam Galactose oxidase, central domain 227 280 - -
Lal9g0352 1010 Gene3D - 316 470 IPR015915 GO:0005515
Lal9g0352 1010 PRINTS Serine/threonine phosphatase family signature 707 734 IPR006186 GO:0016787
Lal9g0352 1010 PRINTS Serine/threonine phosphatase family signature 742 769 IPR006186 GO:0016787
Lal9g0352 1010 PRINTS Serine/threonine phosphatase family signature 775 799 IPR006186 GO:0016787
Lal9g0352 1010 PRINTS Serine/threonine phosphatase family signature 813 839 IPR006186 GO:0016787
Lal9g0352 1010 PRINTS Serine/threonine phosphatase family signature 843 870 IPR006186 GO:0016787
Lal9g0352 1010 PRINTS Serine/threonine phosphatase family signature 903 923 IPR006186 GO:0016787
Lal9g0352 1010 PRINTS Serine/threonine phosphatase family signature 925 941 IPR006186 GO:0016787
Lal9g0352 1010 SUPERFAMILY Metallo-dependent phosphatases 663 970 IPR029052 -
Lal9g0352 1010 MobiDBLite consensus disorder prediction 553 593 - -
Lal9g0352 1010 MobiDBLite consensus disorder prediction 986 1001 - -
Lal9g0352 1010 MobiDBLite consensus disorder prediction 555 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0352 Lal-Chr9 2340907 2353381 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0352 671 906 Calmodulin-binding Proteins AT5G63870 29.044 2.22e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0352 - - gmx:100816091 1749.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0352 9 2340907 2353381 Lal9g0352 9 2340907 2353381 ECH
Lal2g0386 2 2320991 2334354 Lal9g0352 9 2340907 2353381 ECH
Lal2g0386 2 2320991 2334354 Lal9g0352 9 2340907 2353381 LSH
Lal10g1301 10 19033516 19045933 Lal9g0352 9 2340907 2353381 PCT
Lal9g0352 9 2340907 2353381 Lal10g1301 10 19033516 19045933 PCT