Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0344 ATGGACTGCTGGTGCCGGAAACTGACCGTAGTGAACTTAGATCCAGTCAGAAAACGCAGCGGCGGCTTGAGGACAAAACAAGCGGGAAGAGGATCGTGCCGTGGAAGTAAAATGGGGTTTTTGTTGAAGGAAGCTTTGAAGACTATATGTGCTCGGAATCAGTGGTCTTATGCTGTGTTCTGGAAGATCGGTTGCAACAATCCAAAGCTGTTAATCTGGGAAGATTGTTTTTATGAACTTTTACCATCTCTCTTGCCTCCACGCATCGTTGGGACATCTAATTTACCATACCAAGATGGGGAAGGATGCTGGTTCTCTTCCGAGTCTCAGCTGGGGATTCAGGAGGACAAAGAATTGAGGATCCCAATTTTAAGTCGTGACCTTGTCATTACCATCTCACTCAAGTGCTGCCTTTTGTTGTCATCCAGGATAATTGGACGGGCAGCATTTACTGGAAACCATCTGTGGATTCTCTTGAACAATTTCACCAAAGATGCATGTCCACAAGAGGTATATACCGAGTTGCACTACCAATTTTCAGCTGGAATACAGACACTAGCTGTTATTCCGGTGCTTCCCCATGGGGTTGTTCAACTTGGTTCTTTCTTGCCAATAACGGAAAGTATGGGATTTGTGAATGACATGAAGAGCTTGATCTTGCAATTGGCAAGCATTCCTGGTGCTCTTCTATCTGAAGACTATTCAGCAAAACTTTCTTCTGAAAGACTTTCTGGACCAATGACTGATGGTGTACCGGTGACTGTTGATCTACCTGTCATTACCTCTAACTGCGCTCTATCAATATCTAATGGTTCCAATCAACCAAGTAATTCATCTCATGTTTCTTCAAGGCCTATTGCTCAACCCATTAATAATTACCAGGGTTCTGTATTGGCACCTCAAGTGCAGAACCTAAACCAGGTATCACCAAAGTATGGTAACCTTTGCCACCCAACGACTCGTTCAATGAATAGAGCAATTTTCAGTACCCTACAAGAGAATAGAGTTGTTGAGGCTAGAGCTGAAATGATACCATCAAATCTTGATTTGTATATGCAACAGCATTCTGCTGCATATCATACAAGATATCCATTCAATGAATTGGCTGCTTTTGGCCAATCGAACTTCAGTGATGGCAGCCTAAAATATATGGAACCACAAATCTTATCGGGCATTGGGGGACACGGTCATGTTAATCCTATTATGAATCCATTAAGTACCTCAAGTATTTCCCAATTGAGAAGAGATGGAGGCCATATTCTTCAACAGAGTCAGAGTTGTGTTAGTAATTCGATACTTGGAGGAATCCCAATACATAATAGAATGAGTAATCTTTTGAGGGCAAATATGTTCAACAACTCAGTTTCAAACCCTCCCAGGGTTTCCGAGTCTAATTTTTCTGGAATACAAGAAGTTGGGGAAGGACTTCATAATGATAATTCAACTAAAGCTGGGACTTGTTCTCTGCCTAATTTGGCAAATCAATCAGTTCGTAGTCATATGCATTTAGATGGTTCTCATCAGAAGACTCTCCCTGTAGATTTAAAACATGCCCATGATGCTTTTGCTTCAACTGATCAAAGAATAGATAATGATTTGCTTCAGGCCCTTAAGATTCCATCTCTTCACCTTGAGGAACATGCGTCTATGAGTGATCACATCCCAGGTTTTGTTCACGATCACCTCAATAAAGATGGTTCCAGCCAACATATGATGAATGCTAATCATGAAGAAGCTAGTGCTCAACTTCCATCAGGTGATGACCTCTTCGATGTTTTAGGCGTGGATTTCAAAAGGAAAATGCTGAATGGAAACTGGGATGAATTGCTTGCTGACGAATCAGATGCCAATGCAGAAAATCTTGATAAAAAGGCAACAGGCATGAACATGCAGTCTATAGGTCCCGATAATAGTTATTCAGTTAGTGAAGCAATATCAGATAGTGGAATTTTCTCTAGGATTGACACTGACCACCTCTTAGATGCTGTGGTATCAAGGGCTCAATCTGTTGCTAAACAGAATTCTGATGATATGTCTTGCGGGACAGCATTGACAAGAATTAGCACCACTTCTATTCCCTCTCCTATCACCAAGCAGGTCATGTCCGATAATGTTGTCAAAGGGAAATTGTCCGATTTCCCTAAAATGGGTGATAAAATAGGTGCTGTGGAAACTAGTTCTTTTAAGTCTGGGTGTAGCAAGGATGATGCTGGAAACTGTTCTCAAACCACTTCCATATATGGGTCTGAACTTAGTTCATGGGTTGAGAAAGTTAGCAATGCGAAGCTTGAAAATAGTGTTTCAACTGGATATTCTAAGCGGCTAGATGAAGGTTGCAAGTCGAACCGCAAAAGGCTTAAACCTGGAGAGAACCCCAGGCCTCGACCTAAAGACCGCCAAATGATTCAAGATCGTGTGAAAGAGCTGCGGGAAATTGTGCCAAATGGAGCAAAATGTAGCATAGATGCACTTTTGGAAAGGACCATCAAGCATATGCTTTTCTTGCAAAGTGTAACAAAGCATGCTGACAAGCTGAAACATACTGGGGAGTCAAAGATTGTTAGTAAGGAAGGTGGGTTGCTTTTAAAAGATAACTTTGAGGGAGGGGCTACATGGGCATATGAGGTAGGTTCACAATCAATGGTTTGCCCTATCATAGTTGAGGATCTGAGTCCACCTGGTCAGATGCTAGTGGAGATGCTTTGTGAGGAACGAGGTTTCTTTCTTGAAATAGCTGACTTAATCAGAGGATTGGGTTTAACCATCTTGAAGGGAGTCATGGAAGCTCGTAATGACAAGATCTGGGCACGCTTCGTGGTTGAGGCAAACAGGGATGTAACGAGGATGGAAATATTCATGTCACTGGTTCGTCTTCTGGAGCAAACAGCGATGGGCACTGCATCTTCTTCAAATGCAATTGATAACATGTCTATGTATCATTCTTTCCCGCAAGCTACTGAGATATAG 2967 0.4213 MDCWCRKLTVVNLDPVRKRSGGLRTKQAGRGSCRGSKMGFLLKEALKTICARNQWSYAVFWKIGCNNPKLLIWEDCFYELLPSLLPPRIVGTSNLPYQDGEGCWFSSESQLGIQEDKELRIPILSRDLVITISLKCCLLLSSRIIGRAAFTGNHLWILLNNFTKDACPQEVYTELHYQFSAGIQTLAVIPVLPHGVVQLGSFLPITESMGFVNDMKSLILQLASIPGALLSEDYSAKLSSERLSGPMTDGVPVTVDLPVITSNCALSISNGSNQPSNSSHVSSRPIAQPINNYQGSVLAPQVQNLNQVSPKYGNLCHPTTRSMNRAIFSTLQENRVVEARAEMIPSNLDLYMQQHSAAYHTRYPFNELAAFGQSNFSDGSLKYMEPQILSGIGGHGHVNPIMNPLSTSSISQLRRDGGHILQQSQSCVSNSILGGIPIHNRMSNLLRANMFNNSVSNPPRVSESNFSGIQEVGEGLHNDNSTKAGTCSLPNLANQSVRSHMHLDGSHQKTLPVDLKHAHDAFASTDQRIDNDLLQALKIPSLHLEEHASMSDHIPGFVHDHLNKDGSSQHMMNANHEEASAQLPSGDDLFDVLGVDFKRKMLNGNWDELLADESDANAENLDKKATGMNMQSIGPDNSYSVSEAISDSGIFSRIDTDHLLDAVVSRAQSVAKQNSDDMSCGTALTRISTTSIPSPITKQVMSDNVVKGKLSDFPKMGDKIGAVETSSFKSGCSKDDAGNCSQTTSIYGSELSSWVEKVSNAKLENSVSTGYSKRLDEGCKSNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLERTIKHMLFLQSVTKHADKLKHTGESKIVSKEGGLLLKDNFEGGATWAYEVGSQSMVCPIIVEDLSPPGQMLVEMLCEERGFFLEIADLIRGLGLTILKGVMEARNDKIWARFVVEANRDVTRMEIFMSLVRLLEQTAMGTASSSNAIDNMSMYHSFPQATEI 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0344 988 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 786 835 IPR011598 GO:0046983
Lal9g0344 988 CDD bHLH_AtLHW_like 790 859 - -
Lal9g0344 988 MobiDBLite consensus disorder prediction 774 801 - -
Lal9g0344 988 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 42 218 IPR025610 -
Lal9g0344 988 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 38 986 - -
Lal9g0344 988 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 38 986 IPR043561 GO:0003700|GO:0006355
Lal9g0344 988 MobiDBLite consensus disorder prediction 776 801 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0344 Lal-Chr9 2271904 2278477 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0344 563 983 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 50.236 3.52e-111 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0344 - - aprc:113857443 1301.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0344 9 2271904 2278477 Lal9g0344 9 2271904 2278477 ECH
Lal1g0447 1 2774853 2783113 Lal9g0344 9 2271904 2278477 LSH
Lal2g0381 2 2258468 2264925 Lal9g0344 9 2271904 2278477 LSH