Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0337 ATGGAAAATCTTGCACCTGGTGTTCGCTTCTTCCCCACAGAAGAAGAGTTAGTTTCATTCTATTTATACAACAAGCTACAAGGCCAAATAAACGCCATAGATAGAGTTATCCCAGTCATTGACATCAATGCCGTAGAGCCCTCCAATCTCCCAGAACTTGCTGGGGAGCTATGTCGTGGGGACAAAGAGCAATGGTTTTTCTTTACAGCAAGTCAAGAGAGAGAAGCACGAGGAGGAAGACCAAGCAGAACCACTGGTTGTGGATATTGGAAGGCTACAGGTTCTCCTGGATATGTTTACTCTTCTGATAACACTGTCATTGGGGTAAAGAAAACCATGGTTTTCTACAAAGGGAAAGCTCCTAATGGAAACAAAACCAAATGGAAGATGAATGAGTACAAAGCCATTCAACCCTCTAATCAATCCACCCCTCAGTTGAGGAGGGAATTCAGCTTGTGCCGGGTTTATGTCATATCAGGAAGCTTCAGAGCATTTGATAGGCGCCCATTAGAGAAGGAAAGAGTGAAGTCAAGGATTCATGAGATTGAAGAGAACACAGTTGTTGGAGGAGTGGATAGATCATGTTCATCTCAAACTCCACACTTAGTTGGAGATGTAATAAATAATGATGAGATTCAACTCCAAGAATCACAATGGGAAGAATGGGAACAACTTAACTGGTTATAA 687 0.4221 MENLAPGVRFFPTEEELVSFYLYNKLQGQINAIDRVIPVIDINAVEPSNLPELAGELCRGDKEQWFFFTASQEREARGGRPSRTTGCGYWKATGSPGYVYSSDNTVIGVKKTMVFYKGKAPNGNKTKWKMNEYKAIQPSNQSTPQLRREFSLCRVYVISGSFRAFDRRPLEKERVKSRIHEIEENTVVGGVDRSCSSQTPHLVGDVINNDEIQLQESQWEEWEQLNWL 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0337 228 Gene3D NAC domain 13 161 IPR036093 GO:0003677|GO:0006355
Lal9g0337 228 ProSiteProfiles NAC domain profile. 4 158 IPR003441 GO:0003677|GO:0006355
Lal9g0337 228 SUPERFAMILY NAC domain 2 156 IPR036093 GO:0003677|GO:0006355
Lal9g0337 228 Pfam No apical meristem (NAM) protein 6 134 IPR003441 GO:0003677|GO:0006355
Lal9g0337 228 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 189 - -
Lal9g0337 228 PANTHER NAC DOMAIN-CONTAINING PROTEIN 90 4 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0337 Lal-Chr9 2243378 2244323 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0337 7 227 NAC Transcription Factor Family AT5G22380 57.384 3.21e-86 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal9g0337 NAM 1.1e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0337 - - cam:101497878 306.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0337 9 2243378 2244323 Lal9g0337 9 2243378 2244323 ECH