Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0333 ATGGCAGAGACGGTGAAAAAGTCGGTGCCAGAGGCGGAGGAACTGCCCAAGGCTATCGTGCGCCGTGTGGTGAAGGATAAGCTCTCCCGTTGTTCTGAAGATGGAGACATATCCATTCACAAAGACGCTCTTCTTGCATTCTCCGAAAGTGCTAGAATCTTCATCCACTATCTCTCTGCAACGGCTAATGACATATGTAGGGAATCAAAAAGACAGATTATAAACGCAGAGGATGTTTTTGAAGCTCTTAAAGAAACCGAGTTCCCTGAGTTTATACCGTCTCTAAAAGCTTCTCTTGAAGAGTTTAGGATGAAGAATGCTGGAAAGAGAGCAGCAGCGTCAAAGGAAAATGAGACAAAAAAGAAAAGAAAGCTTGAAGCTGAGTCATCTGAGAAAGGCGAGGAAGGTGTGAGCCAGTGA 420 0.45 MAETVKKSVPEAEELPKAIVRRVVKDKLSRCSEDGDISIHKDALLAFSESARIFIHYLSATANDICRESKRQIINAEDVFEALKETEFPEFIPSLKASLEEFRMKNAGKRAAASKENETKKKRKLEAESSEKGEEGVSQ 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0333 139 Gene3D Histone, subunit A 6 139 IPR009072 GO:0046982
Lal9g0333 139 MobiDBLite consensus disorder prediction 106 139 - -
Lal9g0333 139 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 14 83 IPR003958 -
Lal9g0333 139 SUPERFAMILY Histone-fold 15 122 IPR009072 GO:0046982
Lal9g0333 139 Coils Coil 66 86 - -
Lal9g0333 139 Coils Coil 115 135 - -
Lal9g0333 139 PANTHER DNA POLYMERASE EPSILON SUBUNIT 3 4 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0333 Lal-Chr9 2213753 2219268 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0333 15 118 CCAAT-HAP3 Transcription Factor Family AT4G14540 28.846 1.51e-09 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Lal9g0333 CBFD_NFYB_HMF 8.4e-09 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0333 K02326 - gmx:100306382 197.978
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0333 9 2213753 2219268 Lal9g0333 9 2213753 2219268 ECH