Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0328 ATGGAGAGCCAAAGAATAGGACAAATGGAGTTATCTGAGTCAGGGAATTCAAGTCACCATGTCTCTTATGGAGTTCTTCATCATGGGATTAATATTCCTACATCAAGCTTAATGAATCAAGGGTCTGATTTTGATTTTAGAGAGCTGGAAGAGGCAATGGTTCTGCAAGGAATTAAGGCTAGAAATGATGAAGCCAAAGCAGCTTTATTCACAGGCAGGCCTGCTGCTACACTAGAAATGTTCCCATCATGGCCAATGAGATATCAGCAAACCCCTAGAGGAAGTTCAAAGTCAGGAGGAGAAAGCACTGATTCAGGATCAGGTGTTAACACTATTTGTTCAAGCAAAACAAGTGAGCCACCACAGTTTGACACAGAATCTCCAATAAGTAAAAAAGCATCTTCTTCAGATCAACATAATCAGGTTTTTGATCAGCAAAGACAACAAAACCAACTTCAACAACAACCTGATATCATGACAATTGATGCCTCAAGAACAGGCCCATCACAGAATCAATCAACTGCTAAATCACCAACACAGGATAAGAAGAAGGGAGTTAGTTCCATATCAGAGAAGCCACTTGATGCAAAGACACTGAGACGTTTAGCACAGAACAGAGAGGCAGCAAAGAAAAGCCGTCTGAGAAAAAAGGCTTATGTGCAGCAACTAGAGTCAAGTAGATTAAAGCTTAACCAACTTGAACAAGACCTTCAAAGAGCACGTTCTCAGGGCATGTTCTTGGGTTGTGGTGGCAATATAAGCTCTGGAGCTGCAATGTTTGATATGGAGTATGGTAGATGGTTAGAAGATGACCACCGTCTGATGGTGGAGCTCCGTGCCGGGCTGCAGGCGCCGCTATCGGACAATGAACTAAGAGTCATGGTTGATGGATATCTTTCTCATTATGATGACATATTCCGGCTGAAAGGGGTGGTAGCAAAAACAGATGTGTTTCACCTTATTAATGGCATGTGGAACTCCCAAGCTGAACGTTGCTTCCTTTGGATTGGTGGTTTTAGACCCTCCGAGCTCATCACCATGTTGATACAACAATTGGAGCCACTAGCGGAGCAACAAATAATGGGAATGTATGGACTGAGGCATTCATCACACCAAGCGGAGGAAGCTCTTTCTCAAGGCCTTGAACAACTGCAGCAGTCTCTCGTTGAAACCATCGCCGCCGGCCCCGACGGTGTTCAACAGATGATGGTCGCCATGGGCAAGCTTTCCAACCTTGAAGGATTTCTACGTCAGGCTGATAATTTGAGGCAACAAAGTCTTCATCAAATTTGCCGATTATTAACGATTCGTCAGGTAGCAAGGTGTTTTATTGTGATTGGAGAATATTATAGTCGTCTTCGAGCCCTTAGTTCTCTTTGGACATCAAGGCCCCGAGAGACCTTAATGGGGGATGATAACTCGTGCCAAACAACCACCGACATGCAAATGGTTCAATCATCTCAGAATCATTTCCAGAGTTTCTAA 1485 0.4377 MESQRIGQMELSESGNSSHHVSYGVLHHGINIPTSSLMNQGSDFDFRELEEAMVLQGIKARNDEAKAALFTGRPAATLEMFPSWPMRYQQTPRGSSKSGGESTDSGSGVNTICSSKTSEPPQFDTESPISKKASSSDQHNQVFDQQRQQNQLQQQPDIMTIDASRTGPSQNQSTAKSPTQDKKKGVSSISEKPLDAKTLRRLAQNREAAKKSRLRKKAYVQQLESSRLKLNQLEQDLQRARSQGMFLGCGGNISSGAAMFDMEYGRWLEDDHRLMVELRAGLQAPLSDNELRVMVDGYLSHYDDIFRLKGVVAKTDVFHLINGMWNSQAERCFLWIGGFRPSELITMLIQQLEPLAEQQIMGMYGLRHSSHQAEEALSQGLEQLQQSLVETIAAGPDGVQQMMVAMGKLSNLEGFLRQADNLRQQSLHQICRLLTIRQVARCFIVIGEYYSRLRALSSLWTSRPRETLMGDDNSCQTTTDMQMVQSSQNHFQSF 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0328 494 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 195 239 IPR004827 GO:0003700|GO:0006355
Lal9g0328 494 CDD bZIP_HBP1b-like 197 248 - -
Lal9g0328 494 Gene3D - 196 246 - -
Lal9g0328 494 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 200 215 IPR004827 GO:0003700|GO:0006355
Lal9g0328 494 PANTHER TRANSCRIPTION FACTOR TGA9 65 473 - -
Lal9g0328 494 PANTHER TRANSCRIPTION FACTOR TGA9 65 473 - -
Lal9g0328 494 ProSiteProfiles DOG1 domain profile. 257 463 IPR025422 GO:0006351|GO:0043565
Lal9g0328 494 MobiDBLite consensus disorder prediction 88 184 - -
Lal9g0328 494 SMART brlzneu 193 266 IPR004827 GO:0003700|GO:0006355
Lal9g0328 494 MobiDBLite consensus disorder prediction 81 198 - -
Lal9g0328 494 Pfam bZIP transcription factor 196 237 IPR004827 GO:0003700|GO:0006355
Lal9g0328 494 Coils Coil 216 243 - -
Lal9g0328 494 Pfam Seed dormancy control 275 349 IPR025422 GO:0006351|GO:0043565
Lal9g0328 494 SUPERFAMILY Leucine zipper domain 197 239 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0328 Lal-Chr9 2188579 2195441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0328 152 494 bZIP Transcription Factor Family AT1G08320 68.946 1.03e-174 493
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal9g0328 DOG1 3.2e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0328 K14431 - gmx:100775461 719.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0328 9 2188579 2195441 Lal9g0328 9 2188579 2195441 ECH
Lal1g0429 1 2675759 2684237 Lal9g0328 9 2188579 2195441 LSH