Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0325 ATGGCGGAAGAACATCGATGCCACCCTCCACGTCTCTGTAACAATAATTGCGGCTTCTTCGGTAGCCCCACAACGCAGAATCTCTGTTCCAAATGCTTCCGTGATTTACAGCTCAAAGAACAACAATCTTCCTCCGCCAAATTGGTTCTCAACCAAACCCTCGTTCCTCCGCCCGCGATTTCTCAACCTTCGACGCCGTCCGGATTAATCGCCGCTGATTCATCGTCTTCGATCGCGGTTGATTTATCACGCGCCGTGGTGGAAGAGGAGAAGAGCGGATCTGTGGCAGAACCGAAGAGATGCGGGAATTGCAGGAAGCGCGTGGGAATGACGGGGTTCAAGTGCAGGTGTGGGTTAACATTATGCGGGTCCCATCGGTACCCGGAGAAGCATGAATGTGAGTTTGATTTCAAAGAGATGGGAAGGGAGCAGATTGCGAAGGCCAACCCTGTGGTTAAGGGAGAGAAGCTCCGATTGAAGTACTACTCTTTGAAGAGGTTTGTGGAGGAACCAGGGAAGGGTTTGGAGGAATGGGGTGTTGCTCATGATGGTGTTTTGTTCCATTATTCTTCTGGAATGCAGGCAGTGATGTTGGCTTTGGGAATATGTGATTCTCTTAAATGA 624 0.5016 MAEEHRCHPPRLCNNNCGFFGSPTTQNLCSKCFRDLQLKEQQSSSAKLVLNQTLVPPPAISQPSTPSGLIAADSSSSIAVDLSRAVVEEEKSGSVAEPKRCGNCRKRVGMTGFKCRCGLTLCGSHRYPEKHECEFDFKEMGREQIAKANPVVKGEKLRLKYYSLKRFVEEPGKGLEEWGVAHDGVLFHYSSGMQAVMLALGICDSLK 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0325 207 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 3 1 157 - -
Lal9g0325 207 Pfam AN1-like Zinc finger 101 137 IPR000058 GO:0008270
Lal9g0325 207 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 157 - -
Lal9g0325 207 ProSiteProfiles Zinc finger A20-type profile. 7 41 IPR002653 GO:0003677|GO:0008270
Lal9g0325 207 Pfam A20-like zinc finger 11 34 IPR002653 GO:0003677|GO:0008270
Lal9g0325 207 Gene3D - 73 156 IPR035896 -
Lal9g0325 207 Gene3D - 1 53 - -
Lal9g0325 207 ProSiteProfiles Zinc finger AN1-type profile. 95 141 IPR000058 GO:0008270
Lal9g0325 207 SUPERFAMILY AN1-like Zinc finger 91 155 IPR035896 -
Lal9g0325 207 SMART AN1_Zf_4 101 138 IPR000058 GO:0008270
Lal9g0325 207 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 12 54 - -
Lal9g0325 207 SMART A20_3 10 34 IPR002653 GO:0003677|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0325 Lal-Chr9 2169581 2173097 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0325 1 158 C2H2 Transcription Factor Family AT3G52800 47.024 7.98e-40 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0325 - - gmx:100807363 223.016