Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0318 ATCAGTAAAGAGCTACTTCAACCTCGCTTAACCGTAAAGCCTCCGATATCATCGTCGCGAACAATGAACGGCACCGGAAACCGGAGATGGGAGCGTAGAGATAACAACAACAACGGAGGATCCAATAAGCAGAAGCTGATCCGTAGTGCTGAGGAAGAACTCGAGTCCAAATTAGGGTTCGATATTTTCTCCGAGGGCGATAAACGACTTGGATGGTTGCTCAATTTTGCAACGTCATCGAGTGAAGATGAAGACACACACAAAGTCTACAGTTGTGTTGATCTATACTTTGTTACACAGGATGGGTCTTCATTCAAGACAAAATACAGATTTCGTCCTTATTTCTATGCAGCTACAAAGGATAAAATGGAGATGGATGTTGAAGCATATCTGAGGCGACGTTATGAAAGTCAGATTGCAGATATTGAAATAATAGAGAAAGAGGATCTGGATCTGAAAAACCATTTGTCTGGATTAAAAAAATATTATTTAAAGCTATCATTTGATACCGTGCAACAATTGATGAATGTGAGGAGGGACCTCATGCATGTAGTTGAAAGAAATCAGGCAAAGGCTGATGCTGCAGATGCCTATGAGTCTATATTAACTGGGAGAAGAGAACAAAAACCTCAAGACTTTCTAGATTGCATAATCGATCTCCGTGAATATGATGTTCCTTATCATGTTCGCTTTGCCATTGACAATGATATACGGAGTGGCCAGTGGTATGATGTTGGAGTATCCAGTACTGGGGTTACACTTGAGAAGAGGACAGATCTTCTGCAGCGTGCCGAAGTTCGTATTTGTGCATTTGATATTGAGACCACAAAACTTCCATTAAAATTTCCTGACGCTGACTATGATATAATTATGATGATTTCATACATGGTAGATGGACAAGGATACTTGATCATAAACAGAGAGCGTGTTGGGGCGGATATAGAAGATATAGAGTACAGTCCAAAGCCAGAGTTTGAAGGGTGTTTTAAGGTGACAAATGTTCAAAATGAGATTCAGCTTCTCAGATTATGGTTTTCTCATATGCAAGAGGTGAAACCTGGTATCTATGTGACTTATAATGGTGATTTCTTTGATTGGCCATTCCTGGAACGAAGGGCAGCCAGTCATGGGTTCAAAATGAGTGATGAATTGGGTTTTCAATGTGATACAAATCAAGGAGAATGTCGTGCCAAGTTTGCTTGCCATTTAGATTGTTTTGCTTGGGTTAAACGTGATAGTTATCTTCCACAGGGGAGCCAAGGCCTAAAGGCTGTCACAAAAGCAAAGTTGGGTTATGATCCGTTGGAGGTAAACCCCGAGGACATGGTTTGCTTTGCAAAGGAAAAGCCTCAGATGATGGCTTCCTACTCTGTTTCTGATGCAGTGGCAACTTATTACTTGTATACAACTTATGTTCATCCCTTTATTTTCTCTCTTGCCACTATTATACCCATGTCACCAGATGAGGTTTTGCGCAAAGGCAGTGGGACCCTCTGTGAAATGTTGCTCATGGTTCAGGCATACAAGGCCAATGTTATATGTCCTAACAAACACCAATCTGACCCAGAGAAGTTTTATAACAACCATCTTCTTGAGAGTGAGACGTACATAGGTGGCCATGTTGAATGCCTAGAAACTGGTGTGTTTAGATCTGACATTCCATCTAGTTTTACACTTGAGCCATCTGCCTATGAGCAATTGATCAACAACCTTGATCGAGATCTACAATATGCTATAAGAGTAGAGGGCAAGATGGATTTGGAATCTGTCTCCAATTACGATGAAGTAAAAGATGCTATCATGGAAAAGCTGATAAAATTACGAGATAAGCCAATACGTGAAGAATGCCCCCTCATTTATCATCTGGATGTAGCTGCTATGTATCCAAACATAATTTTAACAAACCGGCTTCAGCCACCATCAATTGTTACGGATGAGGTTTGCACCGCTTGTGATTTCAACCGTCCTGGAAAGACTTGTTTACGAAATCTTGAGTGGGTTTGGCGCGGAGAAACATTCACGGCAAAGAAAAGTGACTATAATCATGTAAAGAAGCAGATTGAGTCAGAGTTTGTTGATGGTGCTGATGATAGGCCATCGAAGTCTTTTCTTGACCTGCCCAAGGCAGAGCAACAATTAAGGCTTAAAGAGCGTTTAAAGAAATACTGCCAGAAGGCATATAAACGGGTACTCGACAAGCCAGTTACTGAACTTCGTGAAGCAGGAATCTGCATGCGCGAAAATCCATTTTATGTTGACACTGTTCGCAGTTTCCGGGATAGAAGATATGAATATAAAGGTCTTAATAAAGTTTGGAAGGGAAAGCTATCTGAAGCAAAATCCACTGGGAATTCTATGAAGATCCAGGAAGCACAAGACATGGTAGTGCTTTATGATTCGTTGCAACTTGCCCACAAGTGTATTCTTAATTCCTTTTATGGATATGTGATGCGCAAGGGTGCAAGATGGTACTCCATGGAAATGGCTGGAGTAGTCACATATACTGGTGCAAAAATCATTCAGAATGCCCGCCTGCTGGTAGAGAAAATAGGAAAACCACTTGAACTTGACACAGATGGAATCTGGTGTGCACTTCCTGGATCTTTTCCAGAAAATTTCACTTTTAAAACAAAAGAATCAAAGAGGAAGTTGACAATCTCATACCCTTGTGTCATGCTTAATGTTGATGTGGCAATAAATAATACAAATGACCAGTACCAGACACTCACAGATCCTATTAAGAAAACTTACACAACTCATAGTGAATGCTCTATTGAGTTCGAGGTGGATGGACCATACAAGGCTATGATCATTCCTGCTTCCAAGGAAGAAGGAATTCTAATTAAAAAGCGGTATGCTGTTTTTAATGATGATGGAACTCTTGCAGAGCTGAAAGGTTTTGAGATCAAGCGCAGAGGTGAACTGAAGCTAATCAAAGTTTTCCAGGCTGAGCTTTTTGACAAGTTTCTCCATGGCTCAACCTTAGAAGAATGCTATTCAGCTGTCGCTTCTGTTGCAAACAGCTGGCTTGATCTTCTTGATAGCCAAGGAAAGGATATCGCAGATAGTGAGTTGCTTGATTATATATCAGAATCAAGTACCATGAGCAAGTCTTTAGTTGATTATGGTGAGAAGAAGTCTTGTGCTGTTACCACTGCTAGACGTCTTGCTGACTTTCTAGGTGTTGAAATGGTCAAAGACAAAGGTCTTCGATGTCAATACATCGTAGCAAGTGAACCTAAGGGAACACCTGTAAGTGAGCGTGCTGTTCCTGTGGCAATATTTGAAACAGATGCTGACAGGATGAAGTTCTTTGTCCGGAAATGGTGCAAGGTCTCATCAGATGTTGGCATCCGATCGATAATTGACTGGTCCTATTACAAGCAGCGTCTTAGTTCTGCAGTTCAAAAAATTATCACTATTCCTGCTGCAATGCAACAAGTTGCAAATCCCGTCCCTAGAGTAGTTCATCCTGATTGGTTGCATAAGAAGGTCCGTGAGAAGGAGGACAAGTTTCGCCAACGAAAATTAGTTGATCTCTTCCCAAAAGTAAGCCGGGATGAGTGCTTAAAAAGGCATGACGATTTTGATAGTATCCGTCTTGTGAGGGATGAAGAGATCGTTAATGACTTGGAGGACTTTGGAAACAAGACCAAGAATTCTACATTTGGACCTAGACCAATTATACGACATTATGAAGCTAATAATGAACTGCATCCTTTGAATCTCAATTGTGAAGAAGGTTTTGACCAACAACAAAATGATAATAACAGCAACAATCAGCCCCTTTCACAATTACAACAAAATGATATATCGTGTGAAGATGTTGATAGAACTGTAGATTATCAAGGATGGCTTCAAATAAAGAAGAGAAAGTGGAAACATATCCTAGAAAGGAGAAAGAAGCGAAGATTGCAGAGTTCTAAGAATTCTGACCGTGTAAATGACACTCTTGAACAAATAAACGGTAAGAATATTCAGGGAAGAAGTAATGTCAGTTCATATTTCAGAAGACATGAGGTGGTTCTGACGCAGTACCACTGGCAGATAATACAGCTTCTTCACAGTTCACAGATTGGACAATTTTTTGCTTGGGTTGTTGTTGATGGGGTTATGCTTAAGATTCCTGTTTGTGTTCCTAGAGTCTTTTACCTCAATTCTAGATCACCAATTACTGAAGAATTTCTGGGCAAACGTGTCAACAAGACTCTTCCTCATGGAAGGCATAGTTATAATATGTATGAGGTTACAATTGATGAAGTTCAGTTTAAGGAAGCAAGCAAAAAACTTGCAGCTCTTCTTGCTGATCCTGATGTTGAGGGAATATATGAAACTAAGGTGCCACTGGAGTTCAGGGCTATAATCCAACTTGGTTCTGTATGTAAGGTGGACAAAACTGCTAAAAAACGTAGTCTACAAGAACCATGGAATTTGAGTGAATTGCACATGAAGACCACAACAGAATGTGTTTATCTCGAAAAATCCATACCCTTCTTTTACCTCTATCATAGCATCTCTGAGGGACGGGCTATATATGTTGGGTATTTTCCTGCATCGAAAGCAATAACAGTTGTGGTAGTTAATCCCTACCAAAACAAAGATTTATCACCATCTTTTCTTGAAAGACAATTTCACGATGGCTGCCGAGCTTTGTCTATTGAGGCACCTCCCAGGAATGACATTACTTTTAAGGTGGACTATGTTGGACATGTCAAGGATGCTGAAACAGTGATGCAAAGAACAATAGATGATCACAGGAATGAACATCATGGGCCTATGGTTGCTGTCATTGAATGCCCCAATGTTCAACTAGTAAAATTGGGTATTCGAGCTCTAGATGACTTTCCATGCCTGAGTGTACCTTCTAATGCACGTGATAGTCAGTATCAGATTCTTGGATGGCAACAAGTTGCTGCAAAAATTGGAATGCAACGTTGTGCCGCGTCAGCCCAATGGCTAAACGAGAGAATTGCTATTTCAAGATATGCTCATGTGCCATTGGGGAATTTCGAACTTGACTGGCTTATATTTACAGTGGATACCTTCTTTTCAAGAGCATTGCATGATAATCAACAGGTACTTTGGATATCTGATGACGGTCTTCCAGATTTAGGTGGCATCAGTGATGAAGAGACCTGTTTTGTGGACGAGGTCCGGCAACCTGTTTGTAATTTTCCTGGAGCTTATAGAAAAGTTTCTGTGGAGCTAAAGATTCATCATCTGGCTGTGGATGCTCTTCTTAAATGCAACCAGATTAATGAATTGGAAGGAGGTGCTTTATTAGGATTTGACCATGAATTCAATTCTGGAGCAATTTCCATGAATGGTCAGAATGGAATTGATGAGGCTACCTCATGTGCACATGCCCTTCGAGTTCTAAAACAATTGATCCAACGATGCCTTTCGGATGCAGTTACATCTGGAAATGTATATGCTGATGCAATATTACAAAATCTATATCGGTGGCTTTGCAGTCCTCGATCAAAACTTCACGATCCAGCTCTTCACCAGCTACTCCACAAGGTAATGCAAAAGGTCTTTGCATTGTTGTTGGCAGAGTTCCGCAAGCTGGGTGCAACAATTGTGTTTGCAAACTTCTCAAAAATTATTATAGACACGGGGAAATATGATCTGTCTACAGCCAAAGCTTATTGTGATAGTTTGTTGCGAACTATACAATCTAGAGACCTATTTGAATGGATTGAGCTTGAACCACTGCAGTTCTGGCACTCATTTCTATTCATGGATCAGCATAACTATGGTGGAATACCAGTAAAATTGGATGAAGCCATAAATGATGAATCTCAAGTTGACATTATATCGAGCTGGTCTATTGCTGAATATTTGCCCAAGAAAATTCAGTTCTTGTATATGCCCTGGAAGTATGCACAAAAACAAGCAGCAAAAAGGACTTCATTGCTGAATGATGATGAATCCTGCACCCCATCGATTAACATCGGATCTGCAGAGGTTATTGAATCAGAAATAACGGAGAATATTAAACAGCAGATCAGCTCTTATTTTGCAGACAAGCTTCTAGGAATTGTTAGCGATATTTTTCTTCATATGAAGGGGACAAACAAATCAGAAAACGACCAGAGCATATCATCTGGCCTTCCTCAACTTGGGGGTGATGTTCATAGAGGGGATGCTGCCTTGGAATTTATCAAGCATGTTTGTGCTGTCCTGGCCCTCGACCAAAGTGTACATCATGATATTTTGGTCATGAGGAGAAATTTGTTGAAATATGTTCGTGTCAAGGAGTTTGCTCCAGAAGCTGAGTTTCGTGATCCTTGTCAATCCTTCATCTTATCCAATGTCATATGCAGCTATTGTAGTGACTGCAGAGACTTGGACTTGTGCCGTGACTCGGCATTATTGACTCAAGAGTGGCATTGTGCCGTGCCACAGTGTGGCCAGCCTTATGACCGTGAGGTGATGGAGAATGCTCTACTTCAGATTGTTCGACAAAGAGAACGGCTATACCATCTGCAAGATCTGGTGTGTGTCAGGTGCAACCAGGTTAAAGCTGCACATTTAGCTCAGCAATGTGCATGTGGGGGCTCCTTTAGGTGCAAGGAAGGTGTAAGTGAATTTCGCTCTAAAATGCAGGTTTTCTTAAACGTAGCAATTCGACAGAAATTCCAACTTCTCCAAGAATGCACCTCCTGGATTTTAAAATCTTAG 6687 0.408 ISKELLQPRLTVKPPISSSRTMNGTGNRRWERRDNNNNGGSNKQKLIRSAEEELESKLGFDIFSEGDKRLGWLLNFATSSSEDEDTHKVYSCVDLYFVTQDGSSFKTKYRFRPYFYAATKDKMEMDVEAYLRRRYESQIADIEIIEKEDLDLKNHLSGLKKYYLKLSFDTVQQLMNVRRDLMHVVERNQAKADAADAYESILTGRREQKPQDFLDCIIDLREYDVPYHVRFAIDNDIRSGQWYDVGVSSTGVTLEKRTDLLQRAEVRICAFDIETTKLPLKFPDADYDIIMMISYMVDGQGYLIINRERVGADIEDIEYSPKPEFEGCFKVTNVQNEIQLLRLWFSHMQEVKPGIYVTYNGDFFDWPFLERRAASHGFKMSDELGFQCDTNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVCFAKEKPQMMASYSVSDAVATYYLYTTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYNNHLLESETYIGGHVECLETGVFRSDIPSSFTLEPSAYEQLINNLDRDLQYAIRVEGKMDLESVSNYDEVKDAIMEKLIKLRDKPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRNLEWVWRGETFTAKKSDYNHVKKQIESEFVDGADDRPSKSFLDLPKAEQQLRLKERLKKYCQKAYKRVLDKPVTELREAGICMRENPFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKSTGNSMKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGKPLELDTDGIWCALPGSFPENFTFKTKESKRKLTISYPCVMLNVDVAINNTNDQYQTLTDPIKKTYTTHSECSIEFEVDGPYKAMIIPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTLEECYSAVASVANSWLDLLDSQGKDIADSELLDYISESSTMSKSLVDYGEKKSCAVTTARRLADFLGVEMVKDKGLRCQYIVASEPKGTPVSERAVPVAIFETDADRMKFFVRKWCKVSSDVGIRSIIDWSYYKQRLSSAVQKIITIPAAMQQVANPVPRVVHPDWLHKKVREKEDKFRQRKLVDLFPKVSRDECLKRHDDFDSIRLVRDEEIVNDLEDFGNKTKNSTFGPRPIIRHYEANNELHPLNLNCEEGFDQQQNDNNSNNQPLSQLQQNDISCEDVDRTVDYQGWLQIKKRKWKHILERRKKRRLQSSKNSDRVNDTLEQINGKNIQGRSNVSSYFRRHEVVLTQYHWQIIQLLHSSQIGQFFAWVVVDGVMLKIPVCVPRVFYLNSRSPITEEFLGKRVNKTLPHGRHSYNMYEVTIDEVQFKEASKKLAALLADPDVEGIYETKVPLEFRAIIQLGSVCKVDKTAKKRSLQEPWNLSELHMKTTTECVYLEKSIPFFYLYHSISEGRAIYVGYFPASKAITVVVVNPYQNKDLSPSFLERQFHDGCRALSIEAPPRNDITFKVDYVGHVKDAETVMQRTIDDHRNEHHGPMVAVIECPNVQLVKLGIRALDDFPCLSVPSNARDSQYQILGWQQVAAKIGMQRCAASAQWLNERIAISRYAHVPLGNFELDWLIFTVDTFFSRALHDNQQVLWISDDGLPDLGGISDEETCFVDEVRQPVCNFPGAYRKVSVELKIHHLAVDALLKCNQINELEGGALLGFDHEFNSGAISMNGQNGIDEATSCAHALRVLKQLIQRCLSDAVTSGNVYADAILQNLYRWLCSPRSKLHDPALHQLLHKVMQKVFALLLAEFRKLGATIVFANFSKIIIDTGKYDLSTAKAYCDSLLRTIQSRDLFEWIELEPLQFWHSFLFMDQHNYGGIPVKLDEAINDESQVDIISSWSIAEYLPKKIQFLYMPWKYAQKQAAKRTSLLNDDESCTPSINIGSAEVIESEITENIKQQISSYFADKLLGIVSDIFLHMKGTNKSENDQSISSGLPQLGGDVHRGDAALEFIKHVCAVLALDQSVHHDILVMRRNLLKYVRVKEFAPEAEFRDPCQSFILSNVICSYCSDCRDLDLCRDSALLTQEWHCAVPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCVRCNQVKAAHLAQQCACGGSFRCKEGVSEFRSKMQVFLNVAIRQKFQLLQECTSWILKS 2228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0318 2228 Pfam DNA polymerase family B 778 1095 IPR006134 GO:0000166|GO:0003677
Lal9g0318 2228 Pfam DNA polymerase family B, exonuclease domain 99 425 IPR006133 -
Lal9g0318 2228 SUPERFAMILY Ribonuclease H-like 86 492 IPR012337 -
Lal9g0318 2228 SMART polmehr3 264 867 IPR006172 GO:0000166|GO:0003676|GO:0003887
Lal9g0318 2228 SUPERFAMILY DNA/RNA polymerases 494 1165 IPR043502 -
Lal9g0318 2228 CDD POLBc_epsilon 528 1147 - -
Lal9g0318 2228 Pfam Domain of unknown function (DUF1744) 1556 1923 IPR013697 GO:0003887|GO:0005634|GO:0006260|GO:0008270
Lal9g0318 2228 Gene3D DNA Polymerase, chain B, domain 1 73 254 - -
Lal9g0318 2228 PANTHER DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A 56 2226 IPR029703 GO:0003677|GO:0003887|GO:0006260|GO:0006281|GO:0008622
Lal9g0318 2228 CDD DNA_polB_epsilon_exo 265 468 - -
Lal9g0318 2228 Gene3D Palm domain of DNA polymerase 775 962 IPR023211 -
Lal9g0318 2228 Gene3D - 966 1151 IPR042087 -
Lal9g0318 2228 MobiDBLite consensus disorder prediction 14 43 - -
Lal9g0318 2228 Gene3D - 263 493 IPR036397 GO:0003676
Lal9g0318 2228 SMART DUF1744_2 1539 1923 IPR013697 GO:0003887|GO:0005634|GO:0006260|GO:0008270
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0318 27 2226 Core DNA Replication Machinery Family AT2G27120 67.616 0.0 3032
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0318 K02324 - gmx:100812003 3730.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0318 9 2053357 2078346 Lal9g0318 9 2053357 2078346 ECH