Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0316 ATGAGGACACTGTACACTCATTCAACAAACCTCACTAATTTACCAATTTGCCACTATTCCCAATTCCTCTCTCCAAACCCAAACACACTATCTCTTGTTCCTTCTTCCTCCCAAATTCCACACTTTACTTCCATTTCATCTAAAAAACAACGTTTCTCTTCTTCATTGATTCGATCATCAATGGCGTCTCCTCTTCCAAACCCATTCTCTGTTCTCTTTGTATGCTTAGGCAATATCTGCAGAAGCCCAGCTGCTGAAGGAGTTTTCACTGATTTGGTTAAGAAAAGGGGTTTTGATGCTAACTTCAAAATCGATTCTGCTGGTACCATCGATTACCACGAGGGAAATGAAGCTGACCAGAGAATGAAGGCAGCCTCAAAGAGGCGTGGGATTGAGATAACTTCTATCTCGAGACCAATCAGGCCTTCTGATTTTGTTGACTTTGATCTCATTCTTGCCATGGATAAACAAAATAGAGAGGATATATTGGAGGCCTTCAATAGATGGAAATTTAGTCAGACTTTACCGGAAGATGGACATAAGAAGGTTAAGTTGATGTGTTCATATTGTAATAAGCATGATGAAACTGAAGTGCCTGATCCTTACTATGGTGGACATAAAGGGTTTGAGAAGGTATTAGATTTACTCGAAGATGCTTGTGAATCATTGCTGGAAAGTATTTTGGCAGAAAATAAACACATACAAGACCCCTAG 714 0.3978 MRTLYTHSTNLTNLPICHYSQFLSPNPNTLSLVPSSSQIPHFTSISSKKQRFSSSLIRSSMASPLPNPFSVLFVCLGNICRSPAAEGVFTDLVKKRGFDANFKIDSAGTIDYHEGNEADQRMKAASKRRGIEITSISRPIRPSDFVDFDLILAMDKQNREDILEAFNRWKFSQTLPEDGHKKVKLMCSYCNKHDETEVPDPYYGGHKGFEKVLDLLEDACESLLESILAENKHIQDP 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0316 237 PANTHER LOW MOLECULAR WEIGHT PHOSPHOTYROSINE PROTEIN PHOSPHATASE-RELATED 7 232 - -
Lal9g0316 237 Gene3D - 55 232 - -
Lal9g0316 237 SMART LMWPc_2 69 226 IPR023485 -
Lal9g0316 237 CDD LMWPTP 70 225 - -
Lal9g0316 237 Pfam Low molecular weight phosphotyrosine protein phosphatase 71 224 IPR023485 -
Lal9g0316 237 PRINTS LMW phosphotyrosine protein phosphatase signature 71 88 IPR017867 GO:0004725|GO:0006470
Lal9g0316 237 PRINTS LMW phosphotyrosine protein phosphatase signature 114 130 IPR017867 GO:0004725|GO:0006470
Lal9g0316 237 PRINTS LMW phosphotyrosine protein phosphatase signature 198 213 IPR017867 GO:0004725|GO:0006470
Lal9g0316 237 SUPERFAMILY Phosphotyrosine protein phosphatases I 67 227 IPR036196 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0316 14 231 Protein tyrosine phosphatase (PTP) family AT3G44620 58.400 9.94e-94 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0316 K25307 - qsu:111996756 325.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0316 9 2041839 2044031 Lal9g0316 9 2041839 2044031 ECH