Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0301 ATGGCGATTGCTAGCCTACACAATGTGTCTGTACTTGACTCTTCTTTCCTCAGGGAATCCCATTCTCAGTCATCTAGAAGGCGAGGAGATGGAAGAAGAGGAAGCACCCGGGCATCATCGCTCTTGCGGATGTGGCGAGAGATTGAGGATGAACACGTGGCGAGACAATTTCAAGGAAGGCCTGGTGAAGTATTACTTGAACAAAGGAGTGATGGGTTGATTAATGACCTTTCACATGTAGATATGCCACATAGCCATGTGAGCGGACAATCACATTTGCTAGAAGAGGCAGTTTTGGCTGTTAATGAGTCTGAAATATGGGCACAGTCACAAAGTCAGAATGTACCCCATGGTGATCAAGAGGATTTAAGCAACTCTAGCTGCGAAAACTTTTATGATTTGGGAGAAATCGAAAGAGAAAGAGTGAGGCAAATTTTTAGGGAATGGATGGATAGTGCTGCTAGGGAGCATGGGTTGAACATTTCCCGAAGAAATAACAGTCCCAGGGGAGAATGGCTTGGTCAAACTGAGCAGGAAAGGGTGAGAATCATAAGGGAGTGGGTACAAATGAGTAGCCAGCAGAGTGATGGTTCTTCTGGAGATAATAGGGAAGAACAGTCTGCTGAAATTGATACACAAATTGAACGTGTTCGGGACGGATTTGTTCTTAACCAGAGCGAGGGCCAAATAGAGCATACCCGGAGAGGTATTCGTAAATTACGTGGTCGACAGGTTATGCTTGATATGCTTAAGAAGTCTGAGAGGGAAAGGCAGAGAGAAATTCAGGAGTTGTTGGACCGTCAGTCTGTATCTCATTTTCCCCATCGTAATCGTATACAGGCATTGCTCAGAGGAAGGTTCTTGAGAAATGATAGATGTGGTAACATTATGAGGTCCACTTCCATCGCGCAAAGTGAATTAGGCTTACTGAGGCTAAGACACAGTGTATCAGGCCTACGGGAGGGATTCTTCTCTAGAAAGGACAATACTGATTGCAAGCAAGCAAGAAACAACCTATTTGATACCCCATCTAACACAGACACTGATTTTAATACAAATGAACAAACAGGAGCCAGCAGTTCACATATGGTCCCAACTGTACATTCTGAACCTAATTATAGAGGAAGTAATGGAATTCACATATCAAGTGATCGGAATTGTTTGCAAGGAGTCACATGTGAAAATTTAGATACACAAGACTCTACTCTTCACACAAAAGATCAGTTGCAGTGTACTCAAATTGATTCACTAGATTCACAATCATCACCATGTGTCGTTGTCAAAAGAAGAGTCAGCACCGGACAAAATGTTGATGTGAACAGGAAAGGATTATTCTCTAGAAAGTACTATACTGATTGTAATCAACAAACAAACAACCTATCTAATACCCTGTCTAACAGTGATACTGATTTTAATACAAGTGAACCAACAGGAGCCAGCACTTCACATCTGGTCCCAACTGTACATTCTGAACATGATTACAGAGGAAGTGATGGACTTCACATATCAGGTGACCGAAATTGTTTGCCAGGAGTCACATTTGAAAATTTAGATACGCAAGACTCTACCCTTCATGCAAAAGATCAGTTGCAGTATATGCAAATTGATTCACTAGATTCACAACCATCACCATGTGTTGTTGTCGAAGGAAGAGACAACACCAGGCAAAATGTCGATGTGAACAGGGAGGGATTCTTGTCTAGAAAGGACAATACTGATTGCAATCAAACAACAAACAACCTACCTGTTACCCTCTCTAACGCTGATACTGATTTTAATACAATTGAACAAACAGGAGCCAGCAGTTCACGTCTGGTCACAACTGTACACTCTGAACCTAATTTTAGTGGAAGTGAAGGACTTCACATAGCAGGTGACCAGAATTGCTTGCAAGGAGTCACATTGGAAAATTTAGATACAGAAGTATCTACTCTTCACGCAGAAGATCAGTTGCAGTGGATGCGAATTGATTCACTAGATTCACAACCATCACCATGTGTTGTTGTTGAAAAAAGAGACAACACCGGGCAAAATGTTGATGTGATGCCAACCATGGCTACTTTTGACGAACTTACCCAAGAAAGTTTGCAAATCGAAGATTTAGAGAATAGTGATCTGCAGGAATTCTATGAGGCTTATAATGAGCAATCTGAGCTGGGTGACATAATTAATGGTGAAAACAATCATATGGAGGGCAACATTGTTGATGATATGAATTGGAGTGAATCCAATGCACTGCAAGGAGATCAACTGGAAGAAGTTATTGGCAATGAAGGAAGTGACTGGCATCAGAGTAACGCCTATTGGAGAAATAGCATTGAGGAAAATGTGGATGATAATCAGCTCAGTAGTACAGCCAGCGAATGGCGTGAAAACAGTTTCGGAAATGAAGATGAAGACAACTCTCGTTTGCCAGAAGCTCCAGAAGTGTGGCAAGAAGATGGTGGCTTCCAAGAGGCTGTGGAAAATTGGTTTGGAGGACCTTCTGATCATGAAAGTGCTCCTGTTCGTAGAATTCCCGAACTTTATTTTCCTGATGATGACAATGTGTACAGTGTTGAACTTAGGGAACTGCTTAGCAGAAGAAGTGTCTCTAACCTTCTCCATAGCAGTTTCCGTGAGAGTCTTGACCAGTTGATACAATCATATGTTGAACGGCAAGGTAATGCTCTTGATGAGTTGGAGCTGCAAGAAACAACCCTTTCTTCTGCCTCAGTAGAAGAGGAACTTGAACAACAGAGTCGGGATCAGATTGTTGGTGAGGAGGGTATTGTTAGCAGTCCACTTGACCTACCCTCTTTACCGATACCTCCTCCTTTGCCTCTTTGGGACCGACATCCTCATCGTGACAATTGGTCACAGAATGACGTAAATAACCAGGGTCTAGGAATGGATTGGGAGGTTATTAATGACTTGAAACTTGACATGGCTAGAATGCAGCAAAGGATGAATACTATGCAGAAAATGTTGGAGACGTGTATTGATATGCAGCTGGAGTTGCAGCGCTCAATTAGACAAGAAGTTTCTGCAGCCCTAAATCGCTCAGCTGGCTCATCAGGAACAAATGACTTTGAGACACAGTATGATGAATCTAAATGGGAATGTGTGAGAAAAGGGCTTTGTTGTATATGCTGCGAAAGCAATATTGATTCATTGTTGTACAGATGTGGGCACATGTGTACATGTTCAAATTGTGCCAACGACTTGTTAGAAAGTAGAAGGAAGTGCCCAATGTGTCAAGCGCCTGTGGTAGAGGTGATACGCACATATTCTTTATTATAA 3282 0.4223 MAIASLHNVSVLDSSFLRESHSQSSRRRGDGRRGSTRASSLLRMWREIEDEHVARQFQGRPGEVLLEQRSDGLINDLSHVDMPHSHVSGQSHLLEEAVLAVNESEIWAQSQSQNVPHGDQEDLSNSSCENFYDLGEIERERVRQIFREWMDSAAREHGLNISRRNNSPRGEWLGQTEQERVRIIREWVQMSSQQSDGSSGDNREEQSAEIDTQIERVRDGFVLNQSEGQIEHTRRGIRKLRGRQVMLDMLKKSERERQREIQELLDRQSVSHFPHRNRIQALLRGRFLRNDRCGNIMRSTSIAQSELGLLRLRHSVSGLREGFFSRKDNTDCKQARNNLFDTPSNTDTDFNTNEQTGASSSHMVPTVHSEPNYRGSNGIHISSDRNCLQGVTCENLDTQDSTLHTKDQLQCTQIDSLDSQSSPCVVVKRRVSTGQNVDVNRKGLFSRKYYTDCNQQTNNLSNTLSNSDTDFNTSEPTGASTSHLVPTVHSEHDYRGSDGLHISGDRNCLPGVTFENLDTQDSTLHAKDQLQYMQIDSLDSQPSPCVVVEGRDNTRQNVDVNREGFLSRKDNTDCNQTTNNLPVTLSNADTDFNTIEQTGASSSRLVTTVHSEPNFSGSEGLHIAGDQNCLQGVTLENLDTEVSTLHAEDQLQWMRIDSLDSQPSPCVVVEKRDNTGQNVDVMPTMATFDELTQESLQIEDLENSDLQEFYEAYNEQSELGDIINGENNHMEGNIVDDMNWSESNALQGDQLEEVIGNEGSDWHQSNAYWRNSIEENVDDNQLSSTASEWRENSFGNEDEDNSRLPEAPEVWQEDGGFQEAVENWFGGPSDHESAPVRRIPELYFPDDDNVYSVELRELLSRRSVSNLLHSSFRESLDQLIQSYVERQGNALDELELQETTLSSASVEEELEQQSRDQIVGEEGIVSSPLDLPSLPIPPPLPLWDRHPHRDNWSQNDVNNQGLGMDWEVINDLKLDMARMQQRMNTMQKMLETCIDMQLELQRSIRQEVSAALNRSAGSSGTNDFETQYDESKWECVRKGLCCICCESNIDSLLYRCGHMCTCSNCANDLLESRRKCPMCQAPVVEVIRTYSLL 1093
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0301 1093 MobiDBLite consensus disorder prediction 17 36 - -
Lal9g0301 1093 MobiDBLite consensus disorder prediction 776 809 - -
Lal9g0301 1093 Coils Coil 247 267 - -
Lal9g0301 1093 CDD mRING-HC-C3HC5_NEU1 1041 1079 - -
Lal9g0301 1093 ProSiteProfiles Zinc finger RING-type profile. 1041 1080 IPR001841 -
Lal9g0301 1093 SUPERFAMILY RING/U-box 1040 1087 - -
Lal9g0301 1093 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1017 1091 IPR013083 -
Lal9g0301 1093 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 555 1092 - -
Lal9g0301 1093 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 439 - -
Lal9g0301 1093 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 441 560 - -
Lal9g0301 1093 MobiDBLite consensus disorder prediction 20 34 - -
Lal9g0301 1093 MobiDBLite consensus disorder prediction 776 791 - -
Lal9g0301 1093 MobiDBLite consensus disorder prediction 459 484 - -
Lal9g0301 1093 MobiDBLite consensus disorder prediction 792 807 - -
Lal9g0301 1093 Pfam Zinc finger, C3HC4 type (RING finger) 1038 1085 - -
Lal9g0301 1093 Coils Coil 969 989 - -
Lal9g0301 1093 PANTHER PROTEIN, PUTATIVE-RELATED 441 560 - -
Lal9g0301 1093 PANTHER PROTEIN, PUTATIVE-RELATED 1 439 - -
Lal9g0301 1093 PANTHER PROTEIN, PUTATIVE-RELATED 555 1092 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0301 Lal-Chr9 1928264 1934123 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0301 1041 1087 C3H Transcription Factor Family AT3G06140 38.298 5.38e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0301 - - lang:109355295 1852.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0301 9 1928264 1934123 Lal9g0301 9 1928264 1934123 ECH
Lal2g0320 2 1923549 1928728 Lal9g0301 9 1928264 1934123 ECH
Lal2g0320 2 1923549 1928728 Lal9g0301 9 1928264 1934123 LSH
Lal25g0210 25 1433362 1438666 Lal9g0301 9 1928264 1934123 PCT
Lal9g0301 9 1928264 1934123 Lal25g0210 25 1433362 1438666 PCT