Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0284 ATGTCTTCTTTTTCAGCAAAACAACCCAAAGCTATGAAAACAAAGGTAACTTATTCCAAAGGCACGAAGGATCGTCACACCAAGGTAGATGGAAGAGAAAGCCGTGTTCTATTGCCACCACTCTGTGCTGCTCGTGTCTTTCAACTCACCCGAGAGCTTGGTTACAAGACTCATGGTGAAACCATTGAATGGCTCTTGCGCAAGGCAGAACCCTCCATTGTTGCTGCCACCAGAATATCATCATCTTCTGTGAATAACTCAAGATCATTGGACTCTGAGAACAAAGCTAATGGTCAAGAACCGTTTCGTTCATTGGAGTTTGATTGGTTTAAAAACATTGATGTAGGATTTTCACCTAATGAGATAGCAGTTTTTCAATCCATGATGACCAAGTTCACTTGA 402 0.4179 MSSFSAKQPKAMKTKVTYSKGTKDRHTKVDGRESRVLLPPLCAARVFQLTRELGYKTHGETIEWLLRKAEPSIVAATRISSSSVNNSRSLDSENKANGQEPFRSLEFDWFKNIDVGFSPNEIAVFQSMMTKFT 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0284 133 MobiDBLite consensus disorder prediction 17 31 - -
Lal9g0284 133 MobiDBLite consensus disorder prediction 1 31 - -
Lal9g0284 133 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 7 91 IPR005333 GO:0003700
Lal9g0284 133 Pfam TCP family transcription factor 21 96 IPR017887 -
Lal9g0284 133 MobiDBLite consensus disorder prediction 78 98 - -
Lal9g0284 133 ProSiteProfiles TCP domain profile. 22 76 IPR017887 -
Lal9g0284 133 PANTHER TRANSCRIPTION FACTOR PCF1-LIKE 7 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0284 Lal-Chr9 1792159 1792560 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0284 22 86 TCP Transcription Factor Family AT2G37000 67.692 1.31e-26 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lal9g0284 TCP 1.2e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0284 - K16221 ahf:112736155 132.494