Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0265 ATGTTGAATAAGACTTATTCTTTTGCAAACGCTATGGGCTGCTGTAATTGCTTTGGGTTCATCAGGAGACCGAGACGCCAAAGGCCTAAGCACACAATCAGCAGAAATAATAATATCTCCCAGGAACTGTTGTTGGATGACGACATTGAGGATGATGACCGTTCTTATAGTGACAGTGCTACTAACACAAGTAGTGGTGATGATGGTGAGCGGAAAGCTCGTCCCAAACGATCAGAGGACATTTTGAATTTGAGAGTAGAGAATGACAAGATGTGTAGGCAGTGTCCTGTTAAGGAGACTTACAAAGTTGTTCGCACAGAGGATGAATACGGGAACAAGATGATAAATGAGTATATCCGTGAATGTAAGATTGGTTCTGGCAGCTATGGGAAAGTTGCCCTCTATCGAAGTTCTGTCGACGGAAACCATTATGCAATAAAGGCCTTTCATAAGTCTTATTTACTGAAGCTTCGAGTTGCACCGTCAGAAACTGCCATGACTGATGTTCTACGTGAGGTACTAATTATGAAAATGCTGGAACATCCTAATATAGTCAATCTCATTGAGGTGATTGATGACCCAGAGTCGGATAACTTCTACATGGTACTTGAATATGTGGAAGACAAATGGGTTTGTCATGGTACTGGTCCTGCTTGTAGCCTAGGTGAAGATATTGCTAGAAGATACTTGCGTGATATAGTTTCTGGATTGACATATCTCCATGCTCATCATATAGTACATGGGGATATTAAACCTGATAATCTGTTGATCACTCGTCACGGTACAGTAAAGATTGGGGATTTCAGTGTCAGCCAAGCTTTTGAGGATGATAAGGATGACCTTCGTCGGTCACCTGGCACTCCTGTTTTCACTGCACCAGAATGTATTTTAGGTCTTACCTATCATGGCAAAGCTTCAGACACATGGGCAGTAGGAATTACTTTATACTGTATGATATTGGGTGAATACCCTTTTCTCGGAGACACGCTTCAAGACACATATGACAGAATAGTCAATAATCCTATAGTACTCCCAAATGATATGAACCCGCAGTTAAAGAACTTAATAGAAGGACTTCTTTCCAAAGATCCAAGACTAAGGATGACATTGAATGATGTTGCCGAGCATAGCTGGGTTACCGGAGATGATGGGCCAATTCCAGGGTATCTGTGTTGGTGCGAAAGGAAGTGCTTTGAAAGGGAAGACACTGATGAGAGCAATATGCTTGCTTGA 1233 0.4193 MLNKTYSFANAMGCCNCFGFIRRPRRQRPKHTISRNNNISQELLLDDDIEDDDRSYSDSATNTSSGDDGERKARPKRSEDILNLRVENDKMCRQCPVKETYKVVRTEDEYGNKMINEYIRECKIGSGSYGKVALYRSSVDGNHYAIKAFHKSYLLKLRVAPSETAMTDVLREVLIMKMLEHPNIVNLIEVIDDPESDNFYMVLEYVEDKWVCHGTGPACSLGEDIARRYLRDIVSGLTYLHAHHIVHGDIKPDNLLITRHGTVKIGDFSVSQAFEDDKDDLRRSPGTPVFTAPECILGLTYHGKASDTWAVGITLYCMILGEYPFLGDTLQDTYDRIVNNPIVLPNDMNPQLKNLIEGLLSKDPRLRMTLNDVAEHSWVTGDDGPIPGYLCWCERKCFEREDTDESNMLA 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0265 410 ProSitePatterns Serine/Threonine protein kinases active-site signature. 245 257 IPR008271 GO:0004672|GO:0006468
Lal9g0265 410 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 1 407 - -
Lal9g0265 410 Gene3D Phosphorylase Kinase; domain 1 112 213 - -
Lal9g0265 410 SUPERFAMILY Protein kinase-like (PK-like) 114 387 IPR011009 -
Lal9g0265 410 Pfam Protein kinase domain 120 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g0265 410 ProSitePatterns Protein kinases ATP-binding region signature. 124 147 IPR017441 GO:0005524
Lal9g0265 410 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 1 407 - -
Lal9g0265 410 CDD STKc_LKB1_CaMKK 124 379 - -
Lal9g0265 410 Gene3D Transferase(Phosphotransferase) domain 1 217 385 - -
Lal9g0265 410 MobiDBLite consensus disorder prediction 51 77 - -
Lal9g0265 410 ProSiteProfiles Protein kinase domain profile. 118 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g0265 410 SMART serkin_6 118 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0265 Lal-Chr9 1645139 1650564 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0265 124 386 CBL-interacting serine-threonine protein kinases AT5G35410 31.939 6.31e-42 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-LKB Lal9g0265 Pkinase 2.8e-57 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0265 K00908 - gmx:100789178 655.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0265 9 1645139 1650564 Lal9g0265 9 1645139 1650564 ECH
Lal1g0376 1 2274968 2279807 Lal9g0265 9 1645139 1650564 LSH