Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0260 ATGGCATTGCACACTCTTGTTAAGGATTCAATGTCTTGCCTTAATATTTTCATAATAATTTCATTCCTTATATTCATATCAACCCTTCCTCATACATCATCTGCATCAACCTCTACCAATGTCCTCAACTCATATAAAAAGTTCATAAAAGTTAAGTGCAATTCAACCACTTACTCAAATGTTTGCTACAAGTCTCTTTCCCCTTATGCATCAAAAATCAAAACAAACACTTTCACACTCACCAAAACATCTGTTTATCTGGCTCTAAATGCAACCAAAACTGCATATGTAACATTGAACAAACTATCCAAATCCAAGGGGAACCTAACACATGCAGAGACAGAGGTAATTGCTGACTGCAAATACAATATTCGTGACGCCGTGGATCTACTTCAACAATCTGCTGATGGCCTTGAAGATTTGAATGATATCACTACCGATGAAGAGAGATATCGATGGGATGACATAAAAACATGGATGAGTGCTTCCATAACAGATGAGAGTACATGCACAGATGAGTCTGATGAAATGGAAGTGCAGCCTTCACTGCAGAAGAAGATCAAACGCATTGTTGCTAATGTTGCTCAGAAGAATAGCATTGCTCTGGCTCTTGTCAACAACCTTTCTTACTAA 633 0.3776 MALHTLVKDSMSCLNIFIIISFLIFISTLPHTSSASTSTNVLNSYKKFIKVKCNSTTYSNVCYKSLSPYASKIKTNTFTLTKTSVYLALNATKTAYVTLNKLSKSKGNLTHAETEVIADCKYNIRDAVDLLQQSADGLEDLNDITTDEERYRWDDIKTWMSASITDESTCTDESDEMEVQPSLQKKIKRIVANVAQKNSIALALVNNLSY 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0260 210 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 47 208 IPR035513 -
Lal9g0260 210 TIGRFAM PME_inhib: pectinesterase inhibitor domain 17 208 IPR006501 GO:0004857
Lal9g0260 210 Gene3D Invertase/pectin methylesterase inhibitor family protein 44 209 IPR035513 -
Lal9g0260 210 CDD PMEI-like_3 53 209 - -
Lal9g0260 210 Pfam Plant invertase/pectin methylesterase inhibitor 48 204 IPR006501 GO:0004857
Lal9g0260 210 PANTHER PECTINESTERASE INHIBITOR-LIKE 12 208 - -
Lal9g0260 210 SMART PMEI_2 44 204 IPR006501 GO:0004857
Lal9g0260 210 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 12 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0260 Lal-Chr9 1619051 1619683 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0260 49 209 Carbohydrate Esterase AT1G53830 27.160 2.21e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0260 - - gmx:100776299 231.876