Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0243 ATGCATAGCAAAAGAATGAGAAGCATTTTCTTCAAATCTTCAACCCTTCCAATATTACCATTCTCACCTTCCTCTCCTTACCGCACCTTCTCAGATTCCTTGATGGAAGAAAACTTCGAAAACGCAGAGTCCCTTATAACCAAATGGAACTCCGTAACGGACAAGTCATCACTCACCCCTCTCTTCAACGGCACCCGCTTGGAAGCTAAACAGTACCTTAACGTCGTCAAGGGTCTACAATCCACTATGAAGTATCTGGTTGCACAGGATCCTAACTCCAAGACACTCGTGAGATCACAATTCTTAATGCAACTAGCTATGAAGACGCTTGAGAAAGAGTTCTATCGGATATTATCTTCAAACAGAGAATACTTGGATTCAGAAACCGTTTCGAATCGTTTTTCCACTGACCGGAGAATCAGCTTTTCCGATTACGATGATGAAATCACCGAGGATGATCAGTTTGGCGTTACCGGAAACTCCACTTCCGAGACGGATAGAATGTCAATGATTGCTATGGCGGATTTGAAGGCTATCGCTGATTGCATGATTTCCTCTGGCTATGGCAGAGAGTGTGTCAAGATATACATCATCATGAGAAAATCGATCGTTGATGAAGCTCTTTACCATCTCGGAGTGGAACGGTTGAGTTTCTCTCAGGTTCAAAAGATGGAGTGGGAGGTGGTTGAGTTGAAAATTAAGACCTGGTTGAATGCCGTGAAAGCCGCCGTCGGCACTGTTTTTTACGGCGAGAGAATGCTCTGCGATCATATTTTCTCCACTGCGACGGAGAAGAAATTCGCGGAGTCATGCTTCGCTGAGATTACCAGAGAAGGTGCACTGTTGCTGTTTGGATTCCCGGAAATGGTGGCAAAGTGCAAGAAAACTCCTGAGAAATTGTTCAAGACTTTGGATCTGTACGAAGCCATCTCTGACAATTGGCCTCAAGTTGAATCCATTTTCTCATTCGAATCAACCTCCGGTGTCCGTACAGCGGCGGTTACCTCACTGTTGAAACTCAGCGACGCCGTTCGTGCGATGTTATCGGAGTTCGAATCGGCGATTCAGAAGGACTCCTCGAAGGTTCCGGTTCCAGCCGGTGGTGTTCATCCTCTCACGCGCTACGTCATGAACTACATCACGTTCCTTTCAGATTACAGCAGCGTCCTTGGCGATATCATCGCCGATTGTCCACAATCTCCGTTGCCGGAAACATACTATCGCAGTCCAATGCGCGATGAAAATCCATTGATATCCGATATATCAGAACGAATTGCGTGGCTAATACTCCTCGTTCTCTGCAAACTCGACGCAAAAGCGGAACTCTACAACGACGTGGCGCTCTCTTACATGTTCCTCGCCAATAACATGCAATACGTCGTCGTAAAGGTTCGTAGATCAAACCTAGGGTTCCTTCTTGGACAAGATTGGTTGGCGAAACATGAGACGAAGGTTAAAGAGTACTTATCCAAATACGAACGCGTGGGATGGGGCAATGTATTGTCATCGTTGCCGGAAAATCCCACGGCGGAGATGACGGCAGAGCAAATTAGGGCCGCCTTCATGAGCTTCAACGCAGCGTTTCAAGAAGCGTGTAGGAAACAGTCCACGTGGATCGTATTGGACGCGAAACTACGAGATGAAATTAAAATTTCGATAGCTTCAAAGGTGGAGGACAAGTATAAGGAATTTTATGAAAAGCATTGGTCCGGGTCGGATCCGGTTAATGGGTTATTACCCGAAGATTTAAGGAATTACTTGTCTCACATTTTGCATGGGAACGGTGATTCCGGTGGTGGCTCATCACATTCTTCTTCCACAACCTCCTCGTCTCATCGCTCGCCGGTGAGGTTGTAG 1857 0.4642 MHSKRMRSIFFKSSTLPILPFSPSSPYRTFSDSLMEENFENAESLITKWNSVTDKSSLTPLFNGTRLEAKQYLNVVKGLQSTMKYLVAQDPNSKTLVRSQFLMQLAMKTLEKEFYRILSSNREYLDSETVSNRFSTDRRISFSDYDDEITEDDQFGVTGNSTSETDRMSMIAMADLKAIADCMISSGYGRECVKIYIIMRKSIVDEALYHLGVERLSFSQVQKMEWEVVELKIKTWLNAVKAAVGTVFYGERMLCDHIFSTATEKKFAESCFAEITREGALLLFGFPEMVAKCKKTPEKLFKTLDLYEAISDNWPQVESIFSFESTSGVRTAAVTSLLKLSDAVRAMLSEFESAIQKDSSKVPVPAGGVHPLTRYVMNYITFLSDYSSVLGDIIADCPQSPLPETYYRSPMRDENPLISDISERIAWLILLVLCKLDAKAELYNDVALSYMFLANNMQYVVVKVRRSNLGFLLGQDWLAKHETKVKEYLSKYERVGWGNVLSSLPENPTAEMTAEQIRAAFMSFNAAFQEACRKQSTWIVLDAKLRDEIKISIASKVEDKYKEFYEKHWSGSDPVNGLLPEDLRNYLSHILHGNGDSGGGSSHSSSTTSSSHRSPVRL 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0243 618 MobiDBLite consensus disorder prediction 594 618 - -
Lal9g0243 618 PANTHER EXOCYST COMPLEX PROTEIN EXO70 11 598 IPR004140 GO:0000145|GO:0006887
Lal9g0243 618 Pfam Exo70 exocyst complex subunit 235 587 IPR046364 GO:0000145|GO:0005546|GO:0006887
Lal9g0243 618 MobiDBLite consensus disorder prediction 595 618 - -
Lal9g0243 618 SUPERFAMILY Cullin repeat-like 39 588 IPR016159 -
Lal9g0243 618 Gene3D Exocyst complex component Exo70 45 597 - -
Lal9g0243 618 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 11 598 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0243 Lal-Chr9 1490250 1492106 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0243 10 594 EXO70 exocyst subunit family AT5G59730 46.809 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0243 K07195 - gmx:100808078 831.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0243 9 1490250 1492106 Lal9g0243 9 1490250 1492106 ECH
Lal2g0253 2 1483357 1485234 Lal9g0243 9 1490250 1492106 LSH