Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0236 ATGCGCATAGGTCGTGCAAAAGTGCAGTTCATTCTGACTTGGTCTTTACAAAACAAAGGATTTTGGTTGGTAAAGGATTCTGGGCACATTAATGACAAAGAAACAGCATTTCATAATCCTTCCGAGATTGAACCAAAACGATCTCATGAATGGTTAGCTGATGCTGCTGAAGTAGATTTTTTTCCAAACAAGAAACAAGCAGTGGAAGATGCAAATGGAAAGTCAAGTTCAGGATTTTCAAGTGCAAAATTTTCTCACTGGGAGAACAATCCCAATTTTCATTCAGTCCCAAATATCTGGCAGTTATTTGGGTCTGAAAATAGGTCTGTCAATTTTTCTGAAAATAATGCATCTTATGTTCCGGATGGTGATTCTAATGTGAGACCAAAGATGGTCGACAATCAATATGGAGATGGTCCATCCTTTGGCTTGTCTATATCTCATCCTGTTGAAGATTCTGAAGCATGTCTAAGTTTTGGTGGAATAAAAAAGGTCAACGTAAATCAGGTTAAGGATTCTGATGGTGTACAAACATCAAAGGAACATCATTCTAATAGGCGAAGCAATGGTGATCTGCATCTGGCCTTTAATGATGAAGATGAGACAAGGTCTTCGTCAATAGGACAAGCCTTTGACAAGGATGGTGATGTCGCTTTAATGGGACTCACCTACAACAGAGAGGAAGCCCACATTAGATCATTTGGTGCCCTCTATGGCAAAGGAGACAACACAGTCATATCAATTGATGATTCCTATGATAAAGAGGACACACAAATAATTCCTTTTGATGGTTTCCCCGATGAACATGATATTAACTCTGTGGGAAGGCCTGACATAGACTTTGTTCAATTTTATAATCAATCTTCAGTTCATGTGTCAACAGCTCATGAGAAAGAGACAGATGCTTCAAATTTTGATGCAGTTTTAGGTACTCCTCAGGCAGTAAAATTTAAGTCTGAAACCGTGTCCAAGAATAAGCAAGAGTTCAAAGCAGCTAGGAAAGAAGCTCCAAATAGCTTCCCGTCTAATGTCAGGAGCTTGATATCCACCGGTATACTTGATGGTGTTCCTGTAAAGTACGTCTCAGTGGCTCGGGAGGAACTTCGTGGAATTGTAAAAGGCTCTGGCTATCTTTGTGGGTGTCAACCTTGTAACTATTCCAAGGTCCTGAATGCTTATGAGTTTGAGAGACATGCTGGTTGCAAAACAAAACATCCAAACAATCACATTTATTTTGATAATGGAAAGACCATTTATCAGGTAGTGCAAGAATTGAGGAGTACTCCTCAAAGTTTGTTGTTTGATACAATTCAAACAGTTTTTGGTGCACCAATTAATCAGAAAGCATTTCGCAATTGGAAAGAATCATTTCAAGCAGCAATACGTGAGCTTCAACGCATTTATGGAAAGGAAGAACTTAACCTATAG 1428 0.3908 MRIGRAKVQFILTWSLQNKGFWLVKDSGHINDKETAFHNPSEIEPKRSHEWLADAAEVDFFPNKKQAVEDANGKSSSGFSSAKFSHWENNPNFHSVPNIWQLFGSENRSVNFSENNASYVPDGDSNVRPKMVDNQYGDGPSFGLSISHPVEDSEACLSFGGIKKVNVNQVKDSDGVQTSKEHHSNRRSNGDLHLAFNDEDETRSSSIGQAFDKDGDVALMGLTYNREEAHIRSFGALYGKGDNTVISIDDSYDKEDTQIIPFDGFPDEHDINSVGRPDIDFVQFYNQSSVHVSTAHEKETDASNFDAVLGTPQAVKFKSETVSKNKQEFKAARKEAPNSFPSNVRSLISTGILDGVPVKYVSVAREELRGIVKGSGYLCGCQPCNYSKVLNAYEFERHAGCKTKHPNNHIYFDNGKTIYQVVQELRSTPQSLLFDTIQTVFGAPINQKAFRNWKESFQAAIRELQRIYGKEELNL 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0236 475 Pfam Tify domain binding domain 370 425 IPR032308 -
Lal9g0236 475 PANTHER DNA-BINDING PROTEIN 17 475 - -
Lal9g0236 475 MobiDBLite consensus disorder prediction 172 193 - -
Lal9g0236 475 MobiDBLite consensus disorder prediction 175 193 - -
Lal9g0236 475 PANTHER AUTOIMMUNE REGULATOR 17 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0236 Lal-Chr9 1458529 1462004 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0236 322 458 PHD Transcription Factor Family AT3G53680 52.174 1.70e-40 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0236 - - lang:109355368 872.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0236 9 1458529 1462004 Lal9g0236 9 1458529 1462004 ECH
Lal13g1097 13 8297172 8301311 Lal9g0236 9 1458529 1462004 ECH