Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0225 ATGAAGTGTTTCCATTTTTCAAACGGAGACAGAGAAAGACGAGAACGAGATCGAGAAGATGAAGACGCCATAGCCTCAAGCTCTCGTACCTCTCGTGTTTCATGGGCTCGTTCTCTCAGCATAGCTTCAAGCCTCGTCGACACTACACGAAGGTCAGAATTTGATTCAGACTCAAGAGATTTCTCAGATACTATTCTCTTCCAAGACTTTCTCTCTCAGCGTCGTTCCAACAATCTTCGACTCTTCTCCTTTTCTCACCTCAAATCCGCTACTCGTGGCTTCAGTAGAACCCTCTTGATCGGCGAGGGAGGGTTTGGTTCTGTCTATAAAGGGATTCTTAGTTCTGATGATGGTGATGATTGTTCTCATCAGATTCAGGGGCATAAGGAGTGGATTAATGAGGTGAACTTGTTGGGTGTGATAAAGCATCCGAACCTTGTGAGGTTAGTGGGGTATTGCGCAGAAGATGATGAAAGAGGGATTCAACGGCTTTTGGTGTACGAGCTTATGCCAAATAAGAGCCTGGAAGACCATCTTTTGACTCGAACCCCTTCCGGCACACTCCCATGGTCCACAAGATTAAAAATTGCTCAAGATGCAGCTCGTGGTTTGGCATACCTGCATGAAGAAATGGATTTTCAGCTAATATTTCGAGATTTTAAGACTTCCAATGTCTTGCTGGATGAAGACTTCAATGCAAAGCTTTCTGATTTTGGACTTGCTAGACAAGGACCATCAGAAGGGTCTGGATATGTTTCAACAGCAGTTGTTGGCACCATAGGTTATGCTGCGCCAGAGTATGTTCAGACTGGTAAGCTGACTGCTAAGAGTGATGTCTGGAGCTTTGGTGTAGTTCTCTACGAGCTTATCACCGGGAGGAGAGCTGTAGAAAGAAACCTACCAAGAAATGAACAAAAGCTTCTGGATTGGGTAAGGCCTTATATTTCTGATACAAAGAAGTTCCATCTTATTGTAGACCCCAGACTTGAAGGACAGTATTGCATCCAGTCAGCTCTTAAACTTGCAGTCCTTGCAAACAAGTGTCTCATGAAGCAGGCAAAGTCCCGTCCAAAAATGAGTGAGGTTGTTGAGCTTCTTGGAAACATTATTAATGAGACAATTGCTCTGGATGAAGGTATCTCTCAAGCTGTTGTAGCAACTGGAGAAGGAAAAGAAGTAAATTCATGTGTAGAAGACACTGAACCTGAACCAGCTAAACAAGGGAATAATTATCTGAAGACAGTTTTTGACTTCAGAGACATGGTCAGGTTAAGAAATAAGTCTATTAGAAGGTTTGATTGGAAAAGCTGGGCGCCTGGGCTTATAAGAACG 1332 0.4354 MKCFHFSNGDRERRERDREDEDAIASSSRTSRVSWARSLSIASSLVDTTRRSEFDSDSRDFSDTILFQDFLSQRRSNNLRLFSFSHLKSATRGFSRTLLIGEGGFGSVYKGILSSDDGDDCSHQIQGHKEWINEVNLLGVIKHPNLVRLVGYCAEDDERGIQRLLVYELMPNKSLEDHLLTRTPSGTLPWSTRLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNVLLDEDFNAKLSDFGLARQGPSEGSGYVSTAVVGTIGYAAPEYVQTGKLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLDWVRPYISDTKKFHLIVDPRLEGQYCIQSALKLAVLANKCLMKQAKSRPKMSEVVELLGNIINETIALDEGISQAVVATGEGKEVNSCVEDTEPEPAKQGNNYLKTVFDFRDMVRLRNKSIRRFDWKSWAPGLIRT 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0225 444 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 30 393 - -
Lal9g0225 444 Gene3D Transferase(Phosphotransferase) domain 1 170 384 - -
Lal9g0225 444 MobiDBLite consensus disorder prediction 1 25 - -
Lal9g0225 444 Pfam Protein kinase domain 99 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g0225 444 ProSiteProfiles Protein kinase domain profile. 94 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g0225 444 CDD STKc_IRAK 100 369 - -
Lal9g0225 444 Gene3D Phosphorylase Kinase; domain 1 63 169 - -
Lal9g0225 444 PANTHER OS01G0588500 PROTEIN-RELATED 30 393 - -
Lal9g0225 444 SUPERFAMILY Protein kinase-like (PK-like) 74 366 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0225 Lal-Chr9 1386372 1389284 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0225 76 367 Glycoside Hydrolase AT3G07070 49.000 1.87e-89 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lal9g0225 Pkinase 5.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0225 - - gmx:100811825 654.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0225 9 1386372 1389284 Lal9g0225 9 1386372 1389284 ECH