Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0211 ATGGATGGGCACATGCATCATGATATGGGGGGAATGCATGGGATGGAGCCATCCATGAATGGGAACATGGACATGCCACATATGAAGAAGCATTTCATGCACATGACCTTCTTCTGGGGGAAGGATTCAGAAATTCTTTTCAATCAGTGGCCTGGTGATAAAACTGGTATGTATGTATTAGCCTTGTTGTTCGTCTTTGTCATGTCCTTCCTAGTTGAATTTCTCTCTAGCGCATGGTTTGTCAAACCCGATTCGAACCGTTTTGCGGCCGGTCTGGTTCAGACAGTTATACACCTTCTGAGGGTTGGTCTATCTTTCTTGGTGATGCTAGCGCTCATGTCTTTTAACGGTGGAGTGTTCTTGGTTGCTGTGGTGGGTCATGCTTTGGGGTTCTTTATCTTTCGCAGCGGTGCTTTTAATAAAAAGGAATACATTAAGGGTTTTGATCTTCCGCCTATGAATTGTTAA 468 0.4423 MDGHMHHDMGGMHGMEPSMNGNMDMPHMKKHFMHMTFFWGKDSEILFNQWPGDKTGMYVLALLFVFVMSFLVEFLSSAWFVKPDSNRFAAGLVQTVIHLLRVGLSFLVMLALMSFNGGVFLVAVVGHALGFFIFRSGAFNKKEYIKGFDLPPMNC 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0211 155 Pfam Ctr copper transporter family 35 76 IPR007274 GO:0005375|GO:0016021|GO:0035434
Lal9g0211 155 Pfam Ctr copper transporter family 86 134 IPR007274 GO:0005375|GO:0016021|GO:0035434
Lal9g0211 155 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 10 154 IPR007274 GO:0005375|GO:0016021|GO:0035434
Lal9g0211 155 PANTHER COPPER TRANSPORTER 6-LIKE 10 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0211 Lal-Chr9 1296595 1297062 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0211 36 155 Inorganic Solute Cotransporters AT5G59030 50.806 1.88e-38 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0211 K14686 - gmx:100306175 194.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0211 9 1296595 1297062 Lal9g0211 9 1296595 1297062 ECH
Lal1g0306 1 1854517 1855722 Lal9g0211 9 1296595 1297062 LSH