Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0182 ATGGATAAGGACAAATTTCCTGTTCATGGTGGAGGTTTCCGACCTCCGTCAGCCCGCTTTTCCGGTTATTCATCTACTGCAACCCCATTTAATGTGAGGACAGAGCCATCCTCTTCAACCTCGTCGTATCCTCCATTGGCTGACTCTGCTAGTGCTAGCTTTGTTCATGATATTAGCAGAATGCCTGATAATCCCCCAAGAAATAGAGGTCATCGACGCGCTCATTCTGAGATTCTCACCCTACCCGATGACATTAGCTTTGACAGTGACCTTGGTGTAGTTGGAGGTGCTGATGGGCCCTCGTTCTCTGATGAAACTGAGGAAGACTTGTTGTCCATGTACCTTGATATGGATAAATTCATTTCATCATCTGCTACATCATCGTTTCAAATTGGTGAGCCATCTACTGCTGCTGCAGCACCAACTTCAGGAACCCCCGCCTCATCTGCAGACGACATTGTTGTTGGTACTAGTCAAAGGCCCAGAGTTAGGCACCAACATAGCCAGTCCATGGATGGGTCAACAACCATCAAACCAGAGATGCTGGTCTCAGGTTCTGAAGACATCTCTGGAGCTGATGCCAAAAAATCATTGTCAGCTGCCAAGCTCGCTGAACTCGCTTTGGTTGATCCTAAGCGTGCTAAAAGGATATGGGCAAATAGGCAGTCTGCCGCAAGGTCAAAAGAAAGGAAGATGCGTTACATTTCTGAGCTTGAAAGGAAGGTGCAGACACTGCAAACAGAAGCTATATCCTCATCTGCACAATTAACTCTCTTGCAGAGAGATACAACTGGAGTTTCCACTGAGAACAGTGAGTTGAAATTGAGGTTGCAAACCATGGAGCAACAAGTTCACTTGCAAGATGCATTGAACGATGCATTAAAGGAGGAGATTCAGCATTTGAAAGTATTGACTGGGCAAGGTATGCCAAATGGAGGATCAATGAATTTTGCCTCGTATGGAGGGGGGCAACAATTCTATTCAACCAACAATCAGACCATGCACACTCTTTTAGCTTCTCAACAGCTTCAACAACTTCAAATTCATTCCCAGAAGAAGCAGCAGCAGCAGCAGCATCAACATCAGTTTCTTCAGCAGCAACATCAGTTTCAACTGCATCAACTACAGCAGCAGCAGCAACAACAACAACCGCAACAGCAGCAGCCACAACAACAACCGCAGCAGCAGCAGCCACAACAACATCAACAGCAGCAGCAGGAACAGTAG 1227 0.4637 MDKDKFPVHGGGFRPPSARFSGYSSTATPFNVRTEPSSSTSSYPPLADSASASFVHDISRMPDNPPRNRGHRRAHSEILTLPDDISFDSDLGVVGGADGPSFSDETEEDLLSMYLDMDKFISSSATSSFQIGEPSTAAAAPTSGTPASSADDIVVGTSQRPRVRHQHSQSMDGSTTIKPEMLVSGSEDISGADAKKSLSAAKLAELALVDPKRAKRIWANRQSAARSKERKMRYISELERKVQTLQTEAISSSAQLTLLQRDTTGVSTENSELKLRLQTMEQQVHLQDALNDALKEEIQHLKVLTGQGMPNGGSMNFASYGGGQQFYSTNNQTMHTLLASQQLQQLQIHSQKKQQQQQHQHQFLQQQHQFQLHQLQQQQQQQQPQQQQPQQQPQQQQPQQHQQQQQEQ 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0182 408 MobiDBLite consensus disorder prediction 350 369 - -
Lal9g0182 408 CDD bZIP_plant_RF2 213 262 IPR044759 GO:0003700|GO:0006355
Lal9g0182 408 MobiDBLite consensus disorder prediction 374 408 - -
Lal9g0182 408 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 210 273 IPR004827 GO:0003700|GO:0006355
Lal9g0182 408 MobiDBLite consensus disorder prediction 19 48 - -
Lal9g0182 408 MobiDBLite consensus disorder prediction 1 73 - -
Lal9g0182 408 Gene3D - 211 264 - -
Lal9g0182 408 SUPERFAMILY Leucine zipper domain 212 263 IPR046347 GO:0003700|GO:0006355
Lal9g0182 408 Coils Coil 277 297 - -
Lal9g0182 408 MobiDBLite consensus disorder prediction 132 152 - -
Lal9g0182 408 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 7 369 - -
Lal9g0182 408 Coils Coil 228 255 - -
Lal9g0182 408 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 7 369 - -
Lal9g0182 408 SMART brlzneu 208 272 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0182 Lal-Chr9 1135633 1140100 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0182 19 340 bZIP Transcription Factor Family AT1G06070 70.359 3.36e-163 463
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal9g0182 bZIP_2 3.3e-05 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0182 - - jre:109005463 501.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0276 1 1621817 1625191 Lal9g0182 9 1135633 1140100 LSH
Lal25g0364 25 2468748 2474710 Lal9g0182 9 1135633 1140100 PCT
Lal10g1072 10 17696421 17700076 Lal9g0182 9 1135633 1140100 PCT
Lal8g0306 8 2052761 2055830 Lal9g0182 9 1135633 1140100 PCT
Lal9g0182 9 1135633 1140100 Lal25g0364 25 2468748 2474710 PCT
Lal9g0182 9 1135633 1140100 Lal10g1072 10 17696421 17700076 PCT
Lal9g0182 9 1135633 1140100 Lal8g0306 8 2052761 2055830 PCT