Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0159 ATGGCTTCAAGTTCACTGAGCAAACAAAAGACTTCTGATTCATCATGGACACCAAAACAAAACAAGATGTTTGAAAGAGCACTTGCAAAATATGATAAGGATACCCCTGACCGCTGGCATAATGTAGCAAAAGCAGTTGGTGGAAAATTACCTGATGAAGTTAAGAAACACTATCAAATCCTTTTGGAGGATCTCAGACACATAGAGTCTGGCCGTGTTCCAATTCCCAACTACAAATCATCACTTATCACCACCAATGTTGATGAAGAAAAGAGGCTACTGAAGTATCTGCAGCTGAATTGA 303 0.396 MASSSLSKQKTSDSSWTPKQNKMFERALAKYDKDTPDRWHNVAKAVGGKLPDEVKKHYQILLEDLRHIESGRVPIPNYKSSLITTNVDEEKRLLKYLQLN 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0159 100 CDD SANT 15 62 IPR001005 -
Lal9g0159 100 SMART sant 12 64 IPR001005 -
Lal9g0159 100 ProSiteProfiles Myb-like domain profile. 8 62 IPR001005 -
Lal9g0159 100 MobiDBLite consensus disorder prediction 1 21 - -
Lal9g0159 100 Gene3D - 6 75 - -
Lal9g0159 100 PANTHER PROTEIN RADIALIS-LIKE 3 1 81 - -
Lal9g0159 100 SUPERFAMILY Homeodomain-like 14 70 IPR009057 -
Lal9g0159 100 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 81 IPR044636 GO:0003700
Lal9g0159 100 Pfam Myb-like DNA-binding domain 14 59 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0159 Lal-Chr9 1000589 1001984 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lal9g0159 Myb_DNA-binding 5.9e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0159 - - gmx:100798314 169.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0159 9 1000589 1001984 Lal9g0159 9 1000589 1001984 ECH
Lal9g0159 9 1000589 1001984 Lal23g1420 23 14712257 14713949 ECH
Lal1g0223 1 1327480 1328772 Lal9g0159 9 1000589 1001984 LSH