Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0152 ATGGCTCCCAAGAAAGAAAAGGCTCCTCCACCCTCCTCCAAGCCCGCCAAATCTGGAGGTGGCAAGCAGAAGAAGAAGAAGTGGAGCAAGGGAAAGCAAAAGGAAAAGGTGAATAACATGGTTCTGTTCGATCAGGCATCCTATGACAAGCTCCTCACTGAAGCACCTAAGTTCAAACTCATTACCCCTTCCATTCTCTCTGATCGTTTGAGGATTAATGGATCACTTGCAAGGAAGGCAATTAGAGATTTGATGGCTAGAGGTTCAATCAGGTTGGTGTCTGCACACTCAAGTCAGCAGATTTACACCAGGGCTACAAACACCTAG 327 0.4679 MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQASYDKLLTEAPKFKLITPSILSDRLRINGSLARKAIRDLMARGSIRLVSAHSSQQIYTRATNT 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0152 108 Pfam S25 ribosomal protein 7 105 IPR004977 -
Lal9g0152 108 Gene3D - 21 108 - -
Lal9g0152 108 MobiDBLite consensus disorder prediction 1 36 - -
Lal9g0152 108 PANTHER 40S RIBOSOMAL PROTEIN S25 2 108 IPR004977 -
Lal9g0152 108 PANTHER BNAA04G12260D PROTEIN 2 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0152 Lal-Chr9 963383 965060 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0152 1 107 Cytoplasmic Ribosomal Protein Gene Family AT4G34555 90.654 3.25e-54 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0152 K02975 - fve:101295574 154.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0213 1 1277662 1279821 Lal9g0152 9 963383 965060 LSH