Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0146 ATGGCTTCTTCGAGTGGAGCATCTTCAGGGTCATCACTGATTCAGAACTCAGGTTCTGAAGAGGACTTGGTTGCATTGATGGATCAGAGGAAAAGGAAGAGGATGCTATCAAACCGTGAATCAGCAAGGAGATCTAGAATGAGAAAACAGAAGCACTTGGATGATCTAGTTTCACAAGTGGATCAGCTTAGGAAAGAGAATCAGCAGATACTCACAAGTGTCAACATCACTACACAACAATACATGAGTGTTGAGGCTGAAAACTCAGTGCTGAGGGCTCAGATGGGAGAACTAAGCCACAGGTTAGAGTCTTTGAATGAGATCATTGACTACTTGAATGCCAGCACTGGTGTCTTTGGACCTGCAGTTGCATCAACATTGGTGAACTTCGATATTGGACCAAGTGATAGCTTCTTTAACCCAATGGACATGGCTTATATGAACCAGCCTATTATGGCTTCTGCAGACATGTTGCAGTACTGA 483 0.4369 MASSSGASSGSSLIQNSGSEEDLVALMDQRKRKRMLSNRESARRSRMRKQKHLDDLVSQVDQLRKENQQILTSVNITTQQYMSVEAENSVLRAQMGELSHRLESLNEIIDYLNASTGVFGPAVASTLVNFDIGPSDSFFNPMDMAYMNQPIMASADMLQY 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0146 160 MobiDBLite consensus disorder prediction 1 52 - -
Lal9g0146 160 SUPERFAMILY Leucine zipper domain 30 82 IPR046347 GO:0003700|GO:0006355
Lal9g0146 160 MobiDBLite consensus disorder prediction 24 52 - -
Lal9g0146 160 Gene3D - 28 85 - -
Lal9g0146 160 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 158 - -
Lal9g0146 160 MobiDBLite consensus disorder prediction 1 19 - -
Lal9g0146 160 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 33 48 IPR004827 GO:0003700|GO:0006355
Lal9g0146 160 CDD bZIP_plant_GBF1 31 82 IPR045314 GO:0003700|GO:0006355
Lal9g0146 160 PANTHER BZIP TRANSCRIPTION FACTOR 1 158 - -
Lal9g0146 160 Coils Coil 46 73 - -
Lal9g0146 160 SMART brlzneu 26 90 IPR004827 GO:0003700|GO:0006355
Lal9g0146 160 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 28 91 IPR004827 GO:0003700|GO:0006355
Lal9g0146 160 Pfam bZIP transcription factor 30 82 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0146 Lal-Chr9 939200 939682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0146 25 160 bZIP Transcription Factor Family AT4G34590 60.000 4.14e-52 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal9g0146 bZIP_1 2.1e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0146 K25786 - gmx:100101862 226.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0146 9 939200 939682 Lal9g0146 9 939200 939682 ECH
Lal1g0209 1 1253985 1254461 Lal9g0146 9 939200 939682 LSH